                         SEQUENCE LISTING

<110>  South Dakota State University
       Fang, Ying
       Welbon, Craig
       Nelson, Eric A.
       Brown, Elizabeth M.
 
<120>  IDENTIFICATION OF PORCINE REPRODUCTIVE AND RESPIRATORY SYNDROME 
       VIRUS

<130>  4393.SDSU.PC

<150>  US 61/200,398
<151>  2008-11-26

<160>  43    

<170>  PatentIn version 3.5

<210>  1
<211>  861
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  1

Ala Ala Gly Lys Arg Ala Arg Ala Lys Arg Ala Ala Lys Ser Glu Lys 
1               5                   10                  15      


Asp Ser Ala Pro Thr Pro Lys Val Ala Leu Pro Val Pro Thr Cys Gly 
            20                  25                  30          


Ile Thr Thr Tyr Ser Pro Pro Thr Asp Gly Ser Cys Gly Trp His Val 
        35                  40                  45              


Leu Ala Ala Ile Met Asn Arg Met Ile Asn Gly Asp Phe Thr Ser Pro 
    50                  55                  60                  


Leu Thr Gln Tyr Asn Arg Pro Glu Asp Asp Trp Ala Ser Asp Tyr Asp 
65                  70                  75                  80  


Leu Val Gln Ala Ile Gln Cys Leu Arg Leu Pro Ala Thr Val Val Arg 
                85                  90                  95      


Asn Arg Ala Cys Pro Asn Ala Lys Tyr Leu Ile Lys Leu Asn Gly Val 
            100                 105                 110         


His Trp Glu Val Glu Val Arg Ser Gly Met Ala Pro Arg Ser Leu Ser 
        115                 120                 125             


Arg Glu Cys Val Val Gly Val Cys Ser Glu Gly Cys Val Ala Pro Pro 
    130                 135                 140                 


Tyr Pro Ala Asp Gly Leu Pro Lys Arg Ala Leu Glu Ala Leu Ala Ser 
145                 150                 155                 160 


Ala Tyr Arg Leu Pro Ser Asp Cys Val Ser Ser Gly Ile Ala Asp Phe 
                165                 170                 175     


Leu Ala Asn Pro Pro Pro Gln Glu Phe Trp Thr Leu Asp Lys Met Leu 
            180                 185                 190         


Thr Ser Pro Ser Pro Glu Arg Ser Gly Phe Ser Ser Leu Tyr Lys Leu 
        195                 200                 205             


Leu Leu Glu Val Val Pro Gln Lys Cys Gly Ala Thr Glu Gly Ala Phe 
    210                 215                 220                 


Ile Tyr Ala Val Glu Arg Met Leu Lys Asp Cys Pro Ser Ser Lys Gln 
225                 230                 235                 240 


Ala Met Ala Leu Leu Ala Lys Ile Lys Val Pro Ser Ser Lys Ala Pro 
                245                 250                 255     


Ser Val Ser Leu Asp Glu Cys Phe Pro Thr Asp Val Leu Ala Asp Phe 
            260                 265                 270         


Glu Pro Ala Ser Gln Glu Arg Pro Gln Ser Ser Gly Ala Ala Val Val 
        275                 280                 285             


Leu Cys Ser Pro Asp Ala Lys Glu Phe Glu Glu Ala Ala Pro Glu Glu 
    290                 295                 300                 


Val Gln Glu Ser Gly His Lys Ala Val His Ser Ala Leu Leu Ala Glu 
305                 310                 315                 320 


Gly Pro Asn Asn Glu Gln Val Gln Val Val Ala Gly Glu Gln Leu Lys 
                325                 330                 335     


Leu Gly Gly Cys Gly Leu Ala Val Gly Asn Ala His Glu Gly Ala Leu 
            340                 345                 350         


Val Ser Ala Gly Leu Ile Asn Leu Val Gly Gly Asn Leu Ser Pro Ser 
        355                 360                 365             


Asp Pro Met Lys Glu Asn Met Leu Asn Ser Arg Glu Asp Glu Pro Leu 
    370                 375                 380                 


Asp Leu Ser Gln Pro Ala Pro Ala Ser Thr Thr Thr Leu Val Arg Glu 
385                 390                 395                 400 


Gln Thr Pro Asp Asn Pro Gly Ser Asp Ala Gly Ala Leu Pro Val Thr 
                405                 410                 415     


Val Arg Glu Phe Val Pro Thr Gly Pro Ile Leu Cys His Val Glu His 
            420                 425                 430         


Cys Gly Thr Glu Ser Gly Asp Ser Ser Ser Pro Leu Asp Leu Ser Asp 
        435                 440                 445             


Ala Gln Thr Leu Asp Gln Pro Leu Asn Leu Ser Leu Ala Ala Trp Pro 
    450                 455                 460                 


Val Arg Ala Thr Ala Ser Asp Pro Gly Trp Val His Gly Arg Arg Glu 
465                 470                 475                 480 


Pro Val Phe Val Lys Pro Arg Asn Ala Phe Ser Asp Gly Asp Ser Ala 
                485                 490                 495     


Leu Gln Phe Gly Glu Leu Ser Glu Ser Ser Ser Val Ile Glu Phe Asp 
            500                 505                 510         


Arg Thr Lys Asp Ala Pro Val Val Asp Ala Pro Val Asp Leu Thr Thr 
        515                 520                 525             


Ser Asn Glu Ala Leu Ser Val Val Asp Pro Phe Glu Phe Ala Glu Leu 
    530                 535                 540                 


Lys Arg Pro Arg Phe Ser Ala Gln Ala Leu Ile Asp Arg Gly Gly Pro 
545                 550                 555                 560 


Leu Ala Asp Val His Ala Lys Ile Lys Asn Arg Val Tyr Glu Gln Cys 
                565                 570                 575     


Leu Gln Ala Cys Glu Pro Gly Ser Arg Ala Thr Pro Ala Thr Arg Glu 
            580                 585                 590         


Trp Leu Asp Lys Met Trp Asp Arg Val Asp Met Lys Thr Trp Arg Cys 
        595                 600                 605             


Thr Ser Gln Phe Gln Ala Gly Arg Ile Leu Ala Ser Leu Lys Phe Leu 
    610                 615                 620                 


Pro Asp Met Ile Gln Asp Thr Pro Pro Pro Val Pro Arg Lys Asn Arg 
625                 630                 635                 640 


Ala Ser Asp Asn Ala Gly Leu Lys Gln Leu Val Ala Gln Trp Asp Arg 
                645                 650                 655     


Lys Leu Ser Val Thr Pro Pro Pro Lys Pro Val Gly Pro Val Leu Asp 
            660                 665                 670         


Gln Ile Val Pro Pro Pro Thr Asp Ile Gln Gln Glu Asp Val Thr Pro 
        675                 680                 685             


Ser Asp Gly Pro Pro His Ala Pro Asp Phe Pro Ser Arg Val Ser Thr 
    690                 695                 700                 


Gly Gly Ser Trp Lys Gly Leu Met Leu Ser Gly Thr Arg Leu Ala Gly 
705                 710                 715                 720 


Ser Ile Ser Gln Arg Leu Met Thr Trp Val Phe Glu Val Phe Ser His 
                725                 730                 735     


Leu Pro Ala Phe Met Leu Thr Leu Phe Ser Pro Arg Gly Ser Met Ala 
            740                 745                 750         


Pro Gly Asp Trp Leu Phe Ala Gly Val Val Leu Leu Ala Leu Leu Leu 
        755                 760                 765             


Cys Arg Ser Tyr Pro Ile Leu Gly Cys Leu Pro Leu Leu Gly Val Phe 
    770                 775                 780                 


Ser Gly Ser Leu Arg Arg Val Arg Leu Gly Val Phe Gly Ser Trp Met 
785                 790                 795                 800 


Ala Phe Ala Val Phe Leu Phe Ser Thr Pro Ser Asn Pro Val Gly Ser 
                805                 810                 815     


Ser Cys Asp His Asp Ser Pro Glu Cys His Ala Glu Leu Leu Ala Leu 
            820                 825                 830         


Glu Gln Arg Gln Leu Trp Glu Pro Val Arg Gly Leu Val Val Gly Pro 
        835                 840                 845             


Ser Gly Leu Leu Cys Val Ile Leu Gly Lys Leu Leu Gly 
    850                 855                 860     


<210>  2
<211>  860
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  2

Ala Ala Gly Lys Arg Ala Arg Ala Lys Arg Ala Ala Lys Ser Glu Lys 
1               5                   10                  15      


Gly Ser Ala Pro Thr Pro Lys Val Val Leu Pro Val Pro Thr Cys Gly 
            20                  25                  30          


Val Thr Thr Tyr Ser Pro Pro Thr Asp Gly Ser Cys Gly Trp His Val 
        35                  40                  45              


Leu Ala Ala Ile Met Asn Arg Met Ile Asn Gly Asp Phe Thr Ser Pro 
    50                  55                  60                  


Leu Thr Gln Tyr Asn Arg Pro Glu Asp Asp Trp Ala Ser Asp Phe Asp 
65                  70                  75                  80  


Leu Ile Gln Ala Ile Gln Cys Leu Gln Leu Pro Ala Thr Val Val Arg 
                85                  90                  95      


Asn Arg Ala Cys Pro Asn Ala Lys Tyr Leu Ile Lys Leu Asn Gly Val 
            100                 105                 110         


His Trp Glu Val Glu Val Arg Ser Gly Met Ala Pro Arg Ser Leu Ser 
        115                 120                 125             


Arg Glu Cys Val Val Gly Val Cys Ser Glu Gly Cys Val Ala Pro Pro 
    130                 135                 140                 


Tyr Pro Ala Asp Gly Leu Pro Lys Arg Ala Leu Glu Ala Leu Ala Ser 
145                 150                 155                 160 


Ala Tyr Arg Leu Pro Ser Asp Cys Val Ser Ser Gly Ile Ala Asp Phe 
                165                 170                 175     


Leu Ala Asn Pro Pro Pro Gln Glu Leu Trp Thr Leu Asp Arg Met Leu 
            180                 185                 190         


Thr Ser Pro Ser Pro Glu Arg Ser Gly Phe Ser Ser Leu Tyr Lys Leu 
        195                 200                 205             


Leu Leu Glu Val Val Pro Lys Lys Cys Gly Ala Thr Glu Gly Ala Phe 
    210                 215                 220                 


Ile Tyr Ala Val Glu Arg Met Leu Lys Asp Cys Pro Ser Ser Lys Gln 
225                 230                 235                 240 


Ala Met Thr Leu Leu Ala Lys Ile Lys Val Pro Ser Ser Lys Ala Pro 
                245                 250                 255     


Ser Val Ser Leu Asp Glu Cys Phe Pro Thr Asp Val Ser Ala Asp Phe 
            260                 265                 270         


Glu Pro Ala Phe Gln Glu Arg Pro Gln Ser Ser Gly Ala Ala Asp Val 
        275                 280                 285             


Leu Cys Ser Leu Gly Ala Lys Glu Phe Glu Gly Ala Ala Pro Gly Glu 
    290                 295                 300                 


Val Gln Glu Gly Gly Asp Glu Ala Val Arg Ser Ala Pro Leu Ala Val 
305                 310                 315                 320 


Asp Leu Asn Asp Glu His Ala Arg Val Val Val Gly Glu Gln Leu Lys 
                325                 330                 335     


Leu Gly Gly Cys Gly Leu Thr Val Gly Asn Ala His Glu Gly Val Leu 
            340                 345                 350         


Ala Pro Thr Gly Pro Ile Asn Leu Val Ser Gly Asn Leu Ser Pro Ser 
        355                 360                 365             


Asp Ser Met Arg Gly Asn Met Leu Asn Ser Arg Glu Asp Glu Pro Leu 
    370                 375                 380                 


Asp Leu Ser Leu Pro Ala Pro Val Ala Thr Thr Thr Leu Val Arg Glu 
385                 390                 395                 400 


Gln Thr Pro Asp Asn Pro Gly Ser Asp Ala Gly Pro Leu Pro Val Thr 
                405                 410                 415     


Val Arg Glu Leu Ala Pro Thr Gly Pro Ile Leu Arg His Val Glu His 
            420                 425                 430         


Cys Gly Thr Glu Ser Gly Glu Ser Ser Ser Pro Leu Asn Cys Ser Asp 
        435                 440                 445             


Ala Gln Thr Gln Asp Gln Pro Leu Asn Leu Ser Leu Ala Ala Trp Pro 
    450                 455                 460                 


Val Arg Val Ala Ala Ser Asp Pro Gly Trp Val Tyr Gly Arg Arg Glu 
465                 470                 475                 480 


Pro Val Phe Val Lys Pro Arg Lys Ala Phe Ser Asp Gly Asp Ser Ala 
                485                 490                 495     


Leu Gln Phe Gly Glu Leu Ser Glu Ser Ser Ser Val Val Glu Ser Asp 
            500                 505                 510         


Arg Met Asn Asp Ala Pro Val Val Asp Ala Pro Val Asp Leu Thr Thr 
        515                 520                 525             


Ser Asn Glu Ala Leu Ser Val Val Asp Leu Phe Glu Phe Ala Glu Leu 
    530                 535                 540                 


Lys Arg Pro Arg Phe Ser Ala Gln Ala Leu Ile Asp Arg Gly Gly Pro 
545                 550                 555                 560 


Leu Ala Asp Val His Ala Lys Ile Lys Asn Gln Val Tyr Glu Arg Cys 
                565                 570                 575     


Leu Gln Ala Cys Glu Pro Gly Ser Arg Ala Thr Pro Ala Thr Arg Glu 
            580                 585                 590         


Trp Leu Asp Lys Met Trp Glu Arg Val Asp Met Lys Thr Trp Arg Cys 
        595                 600                 605             


Thr Ser Gln Phe Gln Ala Gly Arg Ile Leu Ala Ser Leu Lys Phe Leu 
    610                 615                 620                 


Pro Asp Met Ile Gln Asp Thr Pro Pro Pro Val Pro Arg Lys Asn Arg 
625                 630                 635                 640 


Ala Ser Asp Asn Ala Gly Leu Lys Gln Leu Val Ala Gln Trp Asp Arg 
                645                 650                 655     


Lys Leu Ser Met Thr Ser Pro Gln Lys Pro Val Gly Ser Val Leu Asp 
            660                 665                 670         


Gln Thr Ala Phe Pro Pro Met Asp Ser Gln Gln Glu Asn Val Thr Pro 
        675                 680                 685             


Ser Asp Gly Pro Pro His Ala Pro Asp Cys Pro Ser Arg Val Ser Met 
    690                 695                 700                 


Gly Gly Gly Trp Lys Gly Leu Val Phe Ser Ser Thr Arg Phe Ala Gly 
705                 710                 715                 720 


Ser Ser Gln Arg Leu Met Thr Trp Val Phe Glu Val Val Ser His Leu 
                725                 730                 735     


Pro Ala Phe Met Leu Thr Leu Phe Ser Pro Arg Gly Ser Met Ala Pro 
            740                 745                 750         


Gly Asp Trp Leu Phe Ala Gly Val Val Leu Leu Ser Leu Leu Leu Cys 
        755                 760                 765             


His Ser Tyr Pro Ile Phe Gly Cys Leu Pro Leu Leu Gly Val Phe Ser 
    770                 775                 780                 


Gly Ser Leu Arg Arg Val Arg Leu Gly Val Phe Gly Ser Trp Met Ala 
785                 790                 795                 800 


Phe Ala Val Phe Leu Phe Ser Thr Pro Ser Asn Pro Val Gly Ser Ser 
                805                 810                 815     


Cys Asp His Asp Ser Pro Glu Cys His Ala Glu Leu Leu Ala Leu Glu 
            820                 825                 830         


Gln Arg Gln Leu Trp Glu Pro Val Arg Gly Leu Val Val Gly Pro Ser 
        835                 840                 845             


Gly Leu Leu Cys Val Ile Leu Gly Lys Leu Leu Gly 
    850                 855                 860 


<210>  3
<211>  855
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  3

Ala Ala Gly Lys Arg Ala Arg Ala Lys Arg Ala Val Lys Gly Glu Lys 
1               5                   10                  15      


Asp Ser Ala Pro Thr Pro Glu Val Ala Leu Ser Val Pro Thr Cys Gly 
            20                  25                  30          


Thr Thr Thr Tyr Ser Pro Pro Thr Asp Gly Ser Cys Gly Trp His Val 
        35                  40                  45              


Leu Ala Ala Ile Met Asn Arg Met Ile Asn Gly Asp Phe Thr Ser Pro 
    50                  55                  60                  


Leu Ala Pro His Asn Arg Pro Glu Asp Asp Trp Ala Ser Asp Tyr Asp 
65                  70                  75                  80  


Leu Val Gln Ala Ile Gln Cys Leu Gln Leu Pro Ala Thr Val Val Arg 
                85                  90                  95      


Asn Arg Ala Cys Pro Asn Ala Lys Tyr Leu Ile Lys Leu Asn Gly Val 
            100                 105                 110         


His Trp Glu Val Glu Ala Arg Ser Gly Met Ala Pro Arg Ser Leu Ser 
        115                 120                 125             


Arg Glu Cys Val Val Gly Val Cys Ser Glu Gly Cys Val Ala Pro Pro 
    130                 135                 140                 


Tyr Pro Ala Asp Gly Leu Pro Lys Arg Ala Leu Glu Ala Leu Ala Ser 
145                 150                 155                 160 


Ala Tyr Arg Leu Pro Ser Asp Cys Val Ser Ser Gly Ile Ala Asp Phe 
                165                 170                 175     


Leu Ala Asn Pro Pro Pro Gln Glu Phe Trp Thr Leu Asp Lys Met Leu 
            180                 185                 190         


Thr Ser Pro Ser Pro Glu Arg Ser Gly Phe Ser Ser Leu Tyr Lys Leu 
        195                 200                 205             


Leu Leu Glu Val Val Pro Arg Lys Cys Gly Thr Thr Glu Gly Ala Phe 
    210                 215                 220                 


Thr Tyr Ala Val Glu Arg Met Leu Lys Asp Cys Pro Ser Ser Lys Gln 
225                 230                 235                 240 


Ala Met Ala Leu Leu Ala Lys Ile Lys Val Pro Ser Ser Lys Ala Pro 
                245                 250                 255     


Ser Val Ser Leu Asp Glu Cys Phe Pro Ala Asp Ala Pro Ala Asp Phe 
            260                 265                 270         


Glu Pro Ala Phe Gln Glu Lys Pro Arg Ser Ser Gly Ala Ala Ile Ala 
        275                 280                 285             


Leu Lys Gly Phe Gly Glu Ala Ala Pro Glu Glu Val Leu Glu Ser Ser 
    290                 295                 300                 


Arg Lys Thr Val His Ser Ala Leu Arg Ala Glu Gly Ser Asn Glu Gln 
305                 310                 315                 320 


Ala Gln Ala Val Ala Gly Glu Gln Leu Lys Leu Gly Gly Cys Gly Ser 
                325                 330                 335     


Ala Val Gly Asn Ala His Gly Gly Val Pro Val Leu Ala Gly Leu Ile 
            340                 345                 350         


Asn Leu Val Gly Gly Asn Phe Ser Pro Pro Asp Ser Met Lys Gly Asn 
        355                 360                 365             


Thr Leu Asn Ser Leu Glu Asp Glu Pro Leu Asp Leu Ser Arg Pro Ala 
    370                 375                 380                 


Leu Ala Val Thr Thr Ser Leu Val Lys Glu Gln Thr Ser Gly Asn Pro 
385                 390                 395                 400 


Gly Leu Gly Ala Gly Ala Leu Pro Val Thr Val Arg Glu Phe Val Pro 
                405                 410                 415     


Thr Gly Pro Ala Leu Arg His Val Glu His Cys Gly Ala Glu Ser Asp 
            420                 425                 430         


Asp Ser Ser Ser Pro Leu Asp Leu Ser Asp Thr Gln Thr Leu Asp Gln 
        435                 440                 445             


Pro Leu Asn Leu Ser Leu Ala Ala Trp Pro Val Lys Ala Thr Ala Ser 
    450                 455                 460                 


Asp Pro Gly Trp Val His Gly Arg Cys Glu Pro Val Phe Val Lys Pro 
465                 470                 475                 480 


Arg Lys Ala Phe Ser Asp Gly Asp Ser Val Leu Gln Leu Gly Glu Leu 
                485                 490                 495     


Ser Glu Ser Ser Ser Val Ile Glu Phe Asp Arg Thr Lys Asp Ala Pro 
            500                 505                 510         


Val Val Asp Ala Pro Val Asp Leu Thr Thr Ser Asn Glu Ala Phe Ser 
        515                 520                 525             


Val Cys Asp Pro Phe Glu Phe Ala Glu Leu Lys Arg Pro Arg Phe Ser 
    530                 535                 540                 


Ala Gln Ala Leu Ile Asp Arg Gly Gly Pro Leu Ala Asp Val His Ala 
545                 550                 555                 560 


Lys Ile Lys Asn Arg Val Tyr Glu Gln Cys Leu Lys Ala Cys Glu Pro 
                565                 570                 575     


Gly Ser Arg Ala Thr Pro Ala Thr Lys Glu Trp Leu Asp Lys Met Trp 
            580                 585                 590         


Asp Arg Val Asp Met Lys Thr Trp Arg Cys Thr Ser Gln Phe Gln Ala 
        595                 600                 605             


Gly Arg Ile Leu Ala Ser Leu Lys Phe Leu Pro Asp Met Ile Gln Asp 
    610                 615                 620                 


Thr Pro Pro Pro Val Pro Arg Lys Asn Arg Ala Ser Asp Asn Ala Gly 
625                 630                 635                 640 


Leu Lys Gln Leu Val Ala Gln Trp Asp Arg Lys Phe Ser Val Thr Pro 
                645                 650                 655     


Pro Pro Lys Leu Ala Gly Pro Val Leu Asp Gln Thr Val Leu Pro Pro 
            660                 665                 670         


Thr Asp Ala Gln Arg Glu Asp Ala Thr Pro Ser Asp Glu Leu Pro His 
        675                 680                 685             


Ala Pro His Leu Leu Ser Arg Val Ser Met Gly Gly Ser Trp Lys Gly 
    690                 695                 700                 


Leu Ile Arg Ser Gly Thr Arg Leu Ala Gly Ser Val Ser Gln His Leu 
705                 710                 715                 720 


Met Thr Trp Val Phe Glu Val Phe Ser His Leu Pro Ala Phe Met Leu 
                725                 730                 735     


Thr Leu Phe Ser Pro Arg Gly Ser Met Ala Pro Gly Asp Trp Leu Phe 
            740                 745                 750         


Ala Gly Val Val Leu Leu Thr Leu Leu Leu Cys Arg Thr Tyr Pro Ile 
        755                 760                 765             


Leu Gly Cys Leu Pro Leu Leu Gly Val Phe Ser Gly Ser Leu Arg Arg 
    770                 775                 780                 


Val Arg Leu Gly Val Phe Gly Ser Trp Met Ala Phe Ala Val Phe Leu 
785                 790                 795                 800 


Phe Ser Val Pro Ser Asn Pro Val Gly Ser Ser Cys Asp His Asp Ser 
                805                 810                 815     


Pro Glu Cys His Ala Glu Leu Leu Thr Leu Glu Gln Arg Gln Leu Trp 
            820                 825                 830         


Glu Pro Val Arg Gly Leu Val Val Gly Pro Ser Gly Leu Leu Cys Val 
        835                 840                 845             


Ile Leu Gly Lys Leu Leu Gly 
    850                 855 


<210>  4
<211>  844
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  4

Ala Ala Gly Lys Arg Ala Arg Ala Lys Arg Ala Thr Lys Gly Glu Lys 
1               5                   10                  15      


Asp Ser Ala Leu Ala Pro Ile Val Pro Leu Pro Val Pro Thr Cys Gly 
            20                  25                  30          


Ile Thr Thr Tyr Ser Pro Pro Thr Asp Gly Ser Cys Gly Trp His Val 
        35                  40                  45              


Leu Ala Ala Ile Val Asn Arg Met Ile Asn Gly Asp Phe Thr Ser Pro 
    50                  55                  60                  


Leu Pro Gln Tyr Asn Arg Pro Glu Asp Asp Trp Ala Ser Asp Tyr Asp 
65                  70                  75                  80  


Leu Ala Gln Ala Ile Gln Cys Leu Gln Leu Pro Ala Thr Val Val Arg 
                85                  90                  95      


Asn Arg Ala Cys Pro Asn Ala Lys Tyr Leu Ile Lys Leu Asn Gly Val 
            100                 105                 110         


His Trp Glu Val Glu Val Arg Ser Gly Met Ala Pro Arg Ser Leu Ser 
        115                 120                 125             


Arg Glu Cys Val Val Gly Val Cys Ser Glu Gly Cys Val Ala Pro Pro 
    130                 135                 140                 


Tyr Pro Ala Asp Gly Leu Pro Lys Arg Ala Leu Glu Ala Leu Ala Ser 
145                 150                 155                 160 


Ala Tyr Arg Leu Pro Ser Asp Cys Val Ser Ser Gly Ile Ala Asp Phe 
                165                 170                 175     


Leu Ala Asp Pro Pro Pro Gln Glu Phe Trp Thr Leu Asp Lys Met Leu 
            180                 185                 190         


Thr Ser Pro Ser Pro Glu Arg Ser Gly Phe Ser Ser Leu Tyr Lys Leu 
        195                 200                 205             


Leu Leu Glu Val Val Pro Gln Lys Cys Gly Ala Thr Glu Gly Ala Phe 
    210                 215                 220                 


Val Tyr Ala Val Glu Arg Met Leu Lys Asp Cys Pro Ser Pro Glu Gln 
225                 230                 235                 240 


Ala Met Ala Leu Leu Ala Lys Ile Lys Val Pro Ser Ser Lys Ala Pro 
                245                 250                 255     


Ser Val Ser Leu Asp Glu Cys Phe Pro Ala Gly Val Pro Ala Asp Phe 
            260                 265                 270         


Glu Pro Ala Phe Gln Glu Arg Pro Arg Ser Pro Gly Ala Ala Val Ala 
        275                 280                 285             


Leu Cys Ser Pro Asp Ala Lys Gly Phe Glu Gly Thr Ala Ser Glu Glu 
    290                 295                 300                 


Ala Gln Glu Ser Gly His Lys Ala Val His Ala Val Pro Leu Ala Glu 
305                 310                 315                 320 


Gly Pro Asn Asn Glu Gln Val Gln Val Val Ala Gly Glu Gln Leu Glu 
                325                 330                 335     


Leu Gly Gly Cys Gly Leu Ala Ile Gly Ser Ala Gln Ser Ser Ser Asp 
            340                 345                 350         


Ser Lys Arg Glu Asn Met His Asn Ser Arg Glu Asp Glu Pro Leu Asp 
        355                 360                 365             


Leu Ser His Pro Ala Pro Ala Ala Thr Thr Thr Leu Val Gly Glu Gln 
    370                 375                 380                 


Thr Pro Asp Asn Pro Gly Ser Asp Ala Ser Ala Leu Pro Ile Ala Val 
385                 390                 395                 400 


Gly Glu Phe Val Pro Thr Gly Pro Ile Leu Arg His Val Glu His Cys 
                405                 410                 415     


Gly Thr Glu Ser Gly Asp Ser Ser Ser Pro Leu Asp Leu Ser Phe Ala 
            420                 425                 430         


Gln Thr Leu Asp Gln Pro Leu Asp Leu Ser Leu Ala Ala Trp Pro Val 
        435                 440                 445             


Lys Ala Thr Ala Ser Asp Pro Gly Trp Val Arg Gly Arg Cys Glu Pro 
    450                 455                 460                 


Val Phe Val Lys Pro Arg Lys Ala Phe Ser Asp Gly Asp Ser Ala Leu 
465                 470                 475                 480 


Gln Phe Gly Glu Leu Ser Glu Ser Ser Ser Val Ile Glu Phe Asp Gln 
                485                 490                 495     


Thr Lys Asp Thr Leu Val Ala Asp Ala Pro Val Asp Leu Thr Thr Ser 
            500                 505                 510         


Asn Glu Ala Leu Ser Ala Val Asp Pro Ser Glu Phe Val Glu Leu Arg 
        515                 520                 525             


Arg Pro Arg His Ser Ala Gln Ala Leu Ile Asp Arg Gly Gly Pro Leu 
    530                 535                 540                 


Ala Asp Val His Ala Lys Ile Lys Asn Arg Val Tyr Glu Gln Cys Leu 
545                 550                 555                 560 


Gln Ala Cys Glu Pro Gly Ser Arg Ala Thr Pro Ala Thr Arg Glu Trp 
                565                 570                 575     


Leu Asp Lys Met Trp Asp Arg Val Asp Met Lys Thr Trp Arg Cys Thr 
            580                 585                 590         


Ser Gln Phe Gln Ala Gly Arg Ile Leu Ala Ser Leu Lys Phe Leu Pro 
        595                 600                 605             


Asp Met Ile Gln Asp Thr Pro Pro Pro Val Pro Arg Lys Asn Arg Ala 
    610                 615                 620                 


Ser Asp Asn Ala Gly Leu Lys Gln Leu Val Ala Arg Trp Asp Lys Lys 
625                 630                 635                 640 


Leu Ser Val Thr Pro Pro Pro Lys Ser Ala Gly Leu Val Leu Asp Gln 
                645                 650                 655     


Thr Val Pro Pro Pro Thr Asp Ile Gln Gln Glu Asp Ala Thr Pro Ser 
            660                 665                 670         


Asp Gly Leu Ser His Ala Ser Asp Phe Ser Ser Arg Val Ser Thr Ser 
        675                 680                 685             


Trp Ser Trp Lys Gly Leu Met Leu Ser Gly Thr Arg Leu Ala Gly Ser 
    690                 695                 700                 


Ala Gly Gln Arg Leu Met Thr Trp Val Phe Glu Val Tyr Ser His Leu 
705                 710                 715                 720 


Pro Ala Phe Ile Leu Thr Leu Phe Ser Pro Arg Gly Ser Met Ala Pro 
                725                 730                 735     


Gly Asp Trp Leu Phe Ala Gly Val Val Leu Leu Ala Leu Leu Leu Cys 
            740                 745                 750         


Arg Ser Tyr Pro Ile Leu Gly Cys Leu Pro Leu Leu Gly Val Phe Ser 
        755                 760                 765             


Gly Ser Leu Arg Arg Val Arg Leu Gly Val Phe Gly Ser Trp Met Ala 
    770                 775                 780                 


Phe Ala Val Phe Leu Phe Ser Thr Pro Ser Asn Pro Val Gly Ser Ser 
785                 790                 795                 800 


Cys Asp His Asp Ser Pro Glu Cys His Ala Glu Leu Leu Ala Leu Glu 
                805                 810                 815     


Gln Arg Gln Leu Trp Glu Pro Val Arg Gly Leu Val Val Gly Pro Ser 
            820                 825                 830         


Gly Leu Leu Cys Val Ile Leu Gly Lys Leu Leu Gly 
        835                 840                 


<210>  5
<211>  980
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  5

Ala Gly Lys Arg Ala Arg Lys Ala Arg Ser Cys Ala Thr Ala Thr Val 
1               5                   10                  15      


Ala Gly Arg Ala Leu Ser Val Arg Glu Thr Arg Gln Ala Lys Glu His 
            20                  25                  30          


Glu Val Ala Gly Ala Asn Lys Ala Glu His Leu Lys His Tyr Ser Pro 
        35                  40                  45              


Pro Ala Glu Gly Asn Cys Gly Trp His Cys Ile Ser Ala Ile Ala Asn 
    50                  55                  60                  


Arg Met Val Asn Ser Lys Phe Glu Thr Thr Leu Pro Glu Arg Val Arg 
65                  70                  75                  80  


Pro Pro Asp Asp Trp Ala Thr Asp Glu Asp Leu Val Asn Ala Ile Gln 
                85                  90                  95      


Ile Leu Arg Leu Pro Ala Ala Leu Asp Arg Asn Gly Ala Cys Thr Ser 
            100                 105                 110         


Ala Lys Tyr Val Leu Lys Leu Glu Gly Glu His Trp Thr Val Thr Val 
        115                 120                 125             


Thr Pro Gly Met Ser Pro Ser Leu Leu Pro Leu Glu Cys Val Gln Gly 
    130                 135                 140                 


Cys Cys Gly His Lys Gly Gly Leu Gly Ser Pro Asp Ala Val Glu Val 
145                 150                 155                 160 


Ser Gly Phe Asp Pro Ala Cys Leu Asp Arg Leu Ala Glu Val Met His 
                165                 170                 175     


Leu Pro Ser Ser Ala Ile Pro Ala Ala Leu Ala Glu Met Ser Gly Asp 
            180                 185                 190         


Ser Asp Arg Ser Ala Ser Pro Val Thr Thr Val Trp Thr Val Ser Gln 
        195                 200                 205             


Phe Phe Ala Arg His Ser Gly Gly Asn His Pro Asp Gln Val Arg Leu 
    210                 215                 220                 


Gly Lys Ile Ile Ser Leu Cys Gln Val Ile Glu Asp Cys Cys Cys Ser 
225                 230                 235                 240 


Gln Asn Lys Thr Asn Arg Val Thr Pro Glu Glu Val Ala Ala Lys Ile 
                245                 250                 255     


Asp Leu Tyr Leu Arg Gly Ala Thr Asn Leu Glu Glu Cys Leu Ala Arg 
            260                 265                 270         


Leu Glu Lys Ala Arg Pro Pro Arg Val Ile Asp Thr Ser Phe Asp Trp 
        275                 280                 285             


Asp Val Val Leu Pro Gly Val Glu Ala Ala Thr Gln Thr Ile Lys Leu 
    290                 295                 300                 


Pro Gln Val Asn Gln Cys Arg Ala Leu Val Pro Val Val Thr Gln Lys 
305                 310                 315                 320 


Ser Leu Asp Asn Asn Ser Val Pro Leu Thr Ala Phe Ser Leu Ala Asn 
                325                 330                 335     


Tyr Tyr Tyr Arg Ala Gln Gly Asp Glu Val Arg His Arg Glu Arg Leu 
            340                 345                 350         


Thr Ala Val Leu Ser Lys Leu Glu Lys Val Val Arg Glu Glu Tyr Gly 
        355                 360                 365             


Leu Met Pro Thr Glu Pro Gly Pro Arg Pro Thr Leu Pro Arg Gly Leu 
    370                 375                 380                 


Asp Glu Leu Lys Asp Gln Met Glu Glu Asp Leu Leu Lys Leu Ala Asn 
385                 390                 395                 400 


Ala Gln Thr Thr Ser Asp Met Met Ala Trp Ala Val Glu Gln Val Asp 
                405                 410                 415     


Leu Lys Thr Trp Val Lys Asn Tyr Pro Arg Trp Thr Pro Pro Pro Pro 
            420                 425                 430         


Pro Pro Lys Val Gln Pro Arg Lys Thr Lys Pro Val Lys Ser Leu Pro 
        435                 440                 445             


Glu Arg Lys Pro Val Pro Ala Pro Arg Arg Lys Val Gly Ser Asp Cys 
    450                 455                 460                 


Gly Ser Pro Val Ser Leu Gly Gly Asp Val Pro Asn Ser Trp Glu Asp 
465                 470                 475                 480 


Leu Ala Val Ser Ser Pro Phe Asp Leu Pro Thr Pro Pro Glu Pro Ala 
                485                 490                 495     


Thr Pro Ser Ser Glu Leu Val Ile Val Ser Ser Pro Gln Cys Ile Phe 
            500                 505                 510         


Arg Pro Ala Thr Pro Leu Ser Glu Pro Ala Pro Ile Pro Ala Pro Arg 
        515                 520                 525             


Gly Thr Val Ser Arg Pro Val Thr Pro Leu Ser Glu Pro Ile Pro Val 
    530                 535                 540                 


Pro Ala Pro Arg Arg Lys Phe Gln Gln Val Lys Arg Leu Ser Ser Ala 
545                 550                 555                 560 


Ala Ala Ile Pro Pro Tyr Gln Asp Glu Pro Leu Asp Leu Ser Ala Ser 
                565                 570                 575     


Ser Gln Thr Glu Tyr Glu Ala Ser Pro Pro Ala Pro Pro Gln Ser Gly 
            580                 585                 590         


Gly Val Leu Gly Val Glu Gly His Glu Ala Glu Glu Thr Leu Ser Glu 
        595                 600                 605             


Ile Ser Asp Met Ser Gly Asn Ile Lys Pro Ala Ser Val Ser Ser Ser 
    610                 615                 620                 


Ser Ser Leu Ser Ser Val Arg Ile Thr Arg Pro Lys Tyr Ser Ala Gln 
625                 630                 635                 640 


Ala Ile Ile Asp Ser Gly Gly Pro Cys Ser Gly His Leu Gln Glu Val 
                645                 650                 655     


Lys Glu Thr Cys Leu Ser Val Met Arg Glu Ala Cys Asp Ala Thr Lys 
            660                 665                 670         


Leu Asp Asp Pro Ala Thr Gln Glu Trp Leu Ser Arg Met Trp Asp Arg 
        675                 680                 685             


Val Asp Met Leu Thr Trp Arg Asn Thr Ser Val Tyr Gln Ala Ile Cys 
    690                 695                 700                 


Thr Leu Asp Gly Arg Leu Lys Phe Leu Pro Lys Met Ile Leu Glu Thr 
705                 710                 715                 720 


Pro Pro Pro Tyr Pro Cys Glu Phe Val Met Met Pro His Thr Pro Ala 
                725                 730                 735     


Pro Ser Val Gly Ala Glu Ser Asp Leu Thr Ile Gly Ser Val Ala Thr 
            740                 745                 750         


Glu Asp Val Pro Arg Ile Leu Glu Lys Ile Glu Asn Val Gly Glu Met 
        755                 760                 765             


Ala Asn Gln Gly Pro Leu Ala Phe Ser Glu Asp Lys Pro Val Asp Asp 
    770                 775                 780                 


Gln Leu Val Asn Asp Pro Arg Ile Ser Ser Arg Arg Pro Asp Glu Ser 
785                 790                 795                 800 


Thr Ser Ala Pro Ser Ala Gly Thr Gly Gly Ala Gly Ser Phe Thr Asp 
                805                 810                 815     


Leu Pro Pro Ser Asp Gly Ala Asp Ala Asp Gly Gly Gly Pro Phe Arg 
            820                 825                 830         


Thr Val Lys Arg Lys Ala Glu Arg Leu Phe Asp Gln Leu Ser Arg Gln 
        835                 840                 845             


Val Phe Asp Leu Val Ser His Leu Pro Val Phe Phe Ser Arg Leu Phe 
    850                 855                 860                 


Tyr Pro Gly Gly Gly Tyr Ser Pro Gly Asp Trp Gly Phe Ala Ala Phe 
865                 870                 875                 880 


Thr Leu Leu Cys Leu Phe Leu Cys Tyr Ser Tyr Pro Ala Phe Gly Ile 
                885                 890                 895     


Ala Pro Leu Leu Gly Val Phe Ser Gly Ser Ser Arg Arg Val Arg Met 
            900                 905                 910         


Gly Val Phe Gly Cys Trp Leu Ala Phe Ala Val Gly Leu Phe Lys Pro 
        915                 920                 925             


Val Ser Asp Pro Val Gly Ala Ala Cys Glu Phe Asp Ser Pro Glu Cys 
    930                 935                 940                 


Arg Asn Ile Leu His Ser Phe Glu Leu Leu Lys Pro Trp Asp Pro Val 
945                 950                 955                 960 


Arg Ser Leu Val Val Gly Pro Val Gly Leu Gly Leu Ala Ile Leu Gly 
                965                 970                 975     


Arg Leu Leu Gly 
            980 


<210>  6
<211>  980
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  6

Ala Gly Lys Arg Ala Arg Lys Ala Arg Ser Gly Met Thr Thr Thr Val 
1               5                   10                  15      


Ala His Arg Ala Leu Pro Ala Arg Glu Ile Gln Gln Ala Lys Lys His 
            20                  25                  30          


Glu Asp Ala Gly Ala Asp Lys Ala Val His Leu Arg His Tyr Ser Pro 
        35                  40                  45              


Pro Ala Asp Gly Asn Cys Gly Trp His Cys Ile Ser Ala Ile Ala Asn 
    50                  55                  60                  


Arg Met Val Asn Ser Lys Phe Glu Thr Thr Leu Pro Glu Arg Val Arg 
65                  70                  75                  80  


Pro Pro Asp Asp Trp Ala Thr Asp Glu Asp Leu Val Asn Thr Ile Gln 
                85                  90                  95      


Ile Leu Lys Leu Pro Ala Ala Leu Asp Arg Asn Gly Ala Cys Val Gly 
            100                 105                 110         


Ala Lys Tyr Val Leu Lys Leu Glu Gly Glu His Trp Thr Val Ser Val 
        115                 120                 125             


Thr Leu Gly Met Ser Pro Ser Leu Leu Pro Leu Glu Cys Val Gln Gly 
    130                 135                 140                 


Cys Cys Glu His Lys Gly Gly Leu Gly Pro Pro Asp Ala Val Glu Val 
145                 150                 155                 160 


Phe Gly Phe Asp Pro Ala Cys Leu Asp Arg Leu Ala Glu Val Met His 
                165                 170                 175     


Leu Pro Ser Ser Val Ile Pro Ala Ala Leu Ala Glu Met Ser Gly Asp 
            180                 185                 190         


Pro Asn Cys Pro Ala Ser Pro Val Thr Thr Val Trp Thr Val Ser Gln 
        195                 200                 205             


Phe Phe Ala Arg His Arg Gly Glu Asn His Pro Asp Gln Val Arg Leu 
    210                 215                 220                 


Gly Lys Ile Ile Ser Leu Cys Gln Val Val Glu Glu Cys Cys Cys His 
225                 230                 235                 240 


Gln Asn Lys Thr Asn Arg Ala Thr Pro Glu Glu Val Ala Ala Arg Ile 
                245                 250                 255     


Asp Gln Tyr Leu His Gly Ala Thr Ser Leu Glu Glu Cys Leu Ile Arg 
            260                 265                 270         


Leu Glu Arg Val Cys Pro Pro Ser Ala Ala Asp Thr Phe Phe Asp Trp 
        275                 280                 285             


Asn Val Val Leu Pro Gly Val Gly Ala Ser Thr Gln Thr Thr Lys Gln 
    290                 295                 300                 


Leu His Val Asn Gln Cys Arg Ala Leu Val Pro Val Val Thr Gln Glu 
305                 310                 315                 320 


Pro Leu Asp Lys Asp Ser Val Pro Leu Thr Ala Phe Ser Leu Ser Asn 
                325                 330                 335     


Cys Tyr Tyr Pro Ala Gln Gly Asp Glu Val Arg His Arg Glu Arg Leu 
            340                 345                 350         


Asn Ser Val Leu Ser Lys Leu Glu Gly Val Val Arg Glu Glu Tyr Gly 
        355                 360                 365             


Leu Thr Pro Thr Glu Pro Gly Pro Arg Pro Ala Leu Pro Asn Gly Leu 
    370                 375                 380                 


Val Glu Leu Lys Asp Gln Met Glu Glu Asp Leu Leu Lys Leu Val Asn 
385                 390                 395                 400 


Ala Gln Ala Thr Ser Glu Met Met Ala Trp Ala Ala Glu Gln Val Asp 
                405                 410                 415     


Leu Lys Ala Trp Val Lys Asn Tyr Pro Arg Trp Thr Pro Pro Pro Pro 
            420                 425                 430         


Pro Pro Arg Val Gln Pro Arg Lys Thr Lys Ser Val Lys Ser Leu Pro 
        435                 440                 445             


Gly Asn Lys Pro Val Pro Ala Pro Arg Arg Lys Val Arg Ser Asp Cys 
    450                 455                 460                 


Gly Ser Pro Ile Leu Met Gly Asp Asn Val Pro Asp Gly Arg Glu Asp 
465                 470                 475                 480 


Leu Thr Val Gly Gly Pro Leu Asp Leu Ser Thr Pro Ser Glu Pro Met 
                485                 490                 495     


Thr Pro Leu Ser Glu Pro Ala Leu Met Pro Ala Leu Gln Tyr Ile Ser 
            500                 505                 510         


Arg Pro Val Thr Ser Leu Ser Val Leu Ala Pro Val Pro Ala Pro Arg 
        515                 520                 525             


Arg Thr Val Ser Arg Pro Val Thr Pro Leu Ser Glu Pro Ile Phe Val 
    530                 535                 540                 


Ser Ala Pro Arg His Lys Phe Gln Gln Val Glu Glu Ala Asn Leu Ala 
545                 550                 555                 560 


Ala Thr Thr Leu Thr His Gln Asp Glu Pro Leu Asp Leu Ser Ala Ser 
                565                 570                 575     


Ser Gln Thr Glu Tyr Glu Ala Ser Pro Leu Thr Pro Leu Gln Asn Met 
            580                 585                 590         


Gly Ile Leu Glu Val Gly Gly Gln Glu Ala Glu Glu Val Leu Ser Glu 
        595                 600                 605             


Ile Ser Asp Thr Leu Asn Asp Ile Asn Pro Ala Pro Val Ser Ser Ser 
    610                 615                 620                 


Ser Ser Leu Ser Ser Val Lys Ile Thr Arg Pro Lys His Ser Ala Gln 
625                 630                 635                 640 


Ala Ile Ile Asp Ser Gly Gly Pro Cys Ser Gly His Leu Arg Arg Glu 
                645                 650                 655     


Lys Glu Ala Cys Leu Ser Ile Met Arg Glu Ala Cys Asp Ala Ala Lys 
            660                 665                 670         


Leu Ser Asp Pro Ala Thr Gln Glu Trp Leu Ser Arg Met Trp Asp Arg 
        675                 680                 685             


Val Asp Met Leu Thr Trp Arg Asn Thr Ser Ala Tyr Gln Ala Phe Arg 
    690                 695                 700                 


Glu Leu Asp Gly Arg Phe Glu Phe Leu Pro Lys Met Ile Leu Glu Thr 
705                 710                 715                 720 


Pro Pro Pro Tyr Pro Cys Glu Phe Val Met Leu Pro His Thr Pro Ala 
                725                 730                 735     


Pro Ser Val Gly Ala Glu Ser Asp Leu Thr Ile Gly Ser Val Ala Thr 
            740                 745                 750         


Glu Asp Val Pro Arg Ile Leu Gly Lys Ile Glu Asn Ala Gly Glu Met 
        755                 760                 765             


Pro Asn Gln Gly Leu Leu Thr Ser Phe Gly Glu Glu Pro Val Cys Asp 
    770                 775                 780                 


Gln Pro Val Lys Asp Ser Trp Met Ser Ser Arg Gly Phe Asp Glu Ser 
785                 790                 795                 800 


Thr Thr Ala Pro Ser Ala Gly Thr Gly Gly Ala Asp Leu Pro Thr Asp 
                805                 810                 815     


Leu Pro Pro Ser Asp Gly Leu Asp Ala Asp Glu Trp Gly Pro Leu Arg 
            820                 825                 830         


Thr Val Arg Lys Lys Ala Glu Arg Leu Phe Asp Gln Leu Ser Arg Gln 
        835                 840                 845             


Val Phe Asn Leu Val Ser His Leu Pro Val Phe Phe Ser His Leu Phe 
    850                 855                 860                 


Lys Ser Asp Ser Gly Tyr Ser Pro Gly Asp Trp Gly Phe Ala Ala Phe 
865                 870                 875                 880 


Thr Leu Phe Cys Leu Phe Leu Cys Tyr Ser Tyr Pro Phe Phe Gly Phe 
                885                 890                 895     


Val Pro Leu Leu Gly Val Phe Ser Gly Ser Ser Arg Arg Val Arg Met 
            900                 905                 910         


Gly Val Phe Gly Cys Trp Leu Ala Phe Ala Val Gly Leu Phe Lys Pro 
        915                 920                 925             


Val Ser Asp Pro Val Gly Thr Ala Cys Glu Phe Asp Ser Pro Glu Cys 
    930                 935                 940                 


Arg Asn Val Leu His Ser Phe Glu Leu Leu Lys Pro Trp Asp Pro Val 
945                 950                 955                 960 


Arg Ser Leu Val Val Gly Pro Val Gly Leu Gly Leu Ala Ile Leu Gly 
                965                 970                 975     


Arg Leu Leu Gly 
            980 


<210>  7
<211>  980
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  7

Ala Gly Lys Arg Ala Arg Lys Ala Arg Ser Cys Ala Thr Ala Thr Val 
1               5                   10                  15      


Ala Gly Arg Ala Leu Ser Val Arg Glu Thr Arg Gln Ala Lys Glu His 
            20                  25                  30          


Glu Val Ala Gly Ala Asn Lys Ala Glu His Leu Lys His Tyr Ser Pro 
        35                  40                  45              


Pro Ala Glu Gly Asn Cys Gly Trp His Cys Ile Ser Ala Ile Ala Asn 
    50                  55                  60                  


Arg Met Val Asn Ser Lys Phe Glu Thr Thr Leu Pro Glu Arg Val Arg 
65                  70                  75                  80  


Pro Pro Asp Asp Trp Ala Thr Asp Glu Asp Leu Val Asn Ala Ile Gln 
                85                  90                  95      


Ile Leu Arg Leu Pro Ala Ala Leu Asp Arg Asn Gly Ala Cys Thr Ser 
            100                 105                 110         


Ala Lys Tyr Val Leu Lys Leu Glu Gly Glu His Trp Thr Val Thr Val 
        115                 120                 125             


Thr Pro Gly Met Ser Pro Ser Leu Leu Pro Leu Glu Cys Val Gln Gly 
    130                 135                 140                 


Cys Cys Gly His Lys Gly Gly Leu Gly Ser Pro Asp Ala Val Glu Val 
145                 150                 155                 160 


Ser Gly Phe Asp Pro Ala Cys Leu Asp Arg Leu Ala Glu Val Met His 
                165                 170                 175     


Leu Pro Ser Ser Ala Ile Pro Ala Ala Leu Ala Glu Met Ser Gly Asp 
            180                 185                 190         


Ser Asp Arg Ser Ala Ser Pro Val Thr Thr Val Trp Thr Val Ser Gln 
        195                 200                 205             


Phe Phe Ala Arg His Ser Gly Gly Asn His Pro Asp Gln Val Arg Leu 
    210                 215                 220                 


Gly Lys Ile Ile Ser Leu Cys Gln Val Ile Glu Asp Cys Cys Cys Ser 
225                 230                 235                 240 


Gln Asn Lys Thr Asn Arg Val Thr Pro Glu Glu Val Ala Ala Lys Phe 
                245                 250                 255     


Asp Leu Tyr Leu Arg Gly Ala Thr Asn Leu Glu Glu Cys Leu Ala Arg 
            260                 265                 270         


Leu Glu Lys Ala Arg Pro Pro Arg Val Ile Asp Thr Phe Phe Asp Trp 
        275                 280                 285             


Asp Val Val Leu Pro Gly Val Glu Ala Ala Thr Gln Thr Ile Lys Leu 
    290                 295                 300                 


Pro Gln Val Asn Gln Cys Arg Ala Leu Val Pro Val Val Thr Gln Lys 
305                 310                 315                 320 


Ser Leu Asp Asn Asn Ser Val Pro Leu Thr Ala Phe Ser Leu Ala Asn 
                325                 330                 335     


Tyr Tyr Tyr Arg Ala Gln Gly Asp Glu Val Arg His Arg Glu Arg Leu 
            340                 345                 350         


Thr Ala Val Leu Ser Lys Leu Glu Lys Val Val Arg Glu Glu Tyr Gly 
        355                 360                 365             


Leu Met Pro Thr Lys Pro Gly Pro Arg Pro Thr Leu Pro Arg Gly Leu 
    370                 375                 380                 


Asp Glu Leu Lys Asp Gln Met Glu Glu Asp Leu Leu Lys Leu Ala Asn 
385                 390                 395                 400 


Ala Gln Thr Thr Ser Asp Met Met Ala Trp Ala Ala Glu Gln Val Asp 
                405                 410                 415     


Leu Lys Thr Trp Val Lys Asn Tyr Pro Arg Trp Thr Pro Pro Pro Pro 
            420                 425                 430         


Ser Pro Lys Val Gln Leu Arg Lys Thr Lys Pro Val Lys Ser Leu Pro 
        435                 440                 445             


Lys Arg Lys Pro Val Pro Ala Pro Arg Arg Lys Val Gly Ser Asp Cys 
    450                 455                 460                 


Gly Ser Pro Val Ser Leu Gly Gly Asp Val Pro Asn Ser Trp Glu Asp 
465                 470                 475                 480 


Leu Ala Val Ser Ser Pro Phe Asp Leu Pro Thr Pro Pro Glu Pro Ala 
                485                 490                 495     


Ile Pro Ser Ser Glu Leu Val Ile Val Ser Ser Pro Gln Cys Ile Phe 
            500                 505                 510         


Arg Pro Ala Thr Pro Leu Ser Glu Pro Ala Pro Ile Pro Ala Pro Arg 
        515                 520                 525             


Gly Thr Val Ser Arg Pro Val Thr Pro Leu Ser Glu Pro Ile Pro Val 
    530                 535                 540                 


Pro Ala Pro Arg Arg Lys Phe Gln Gln Val Lys Arg Leu Ser Ser Ala 
545                 550                 555                 560 


Ala Ala Ile Pro Pro Tyr Gln Asn Glu Pro Leu Asp Leu Ser Ala Ser 
                565                 570                 575     


Ser Gln Thr Glu Tyr Glu Ala Ser Pro Pro Ala Pro Pro Gln Ser Gly 
            580                 585                 590         


Gly Val Leu Gly Val Glu Gly His Glu Ala Glu Glu Thr Leu Ser Glu 
        595                 600                 605             


Ile Ser Asp Met Ser Gly Asn Ile Lys Pro Ala Ser Val Ser Ser Ser 
    610                 615                 620                 


Ser Ser Leu Ser Ser Val Arg Ile Thr Arg Pro Lys Tyr Ser Ala Gln 
625                 630                 635                 640 


Ala Ile Ile Asp Ser Gly Gly Pro Cys Ser Gly His Leu Gln Glu Val 
                645                 650                 655     


Lys Glu Thr Cys Leu Ser Val Met Arg Glu Ala Cys Asp Ala Thr Lys 
            660                 665                 670         


Leu Asp Asp Pro Ala Thr Gln Glu Trp Leu Ser Arg Met Trp Asp Arg 
        675                 680                 685             


Val Asp Met Leu Thr Trp Arg Asn Thr Ser Val Tyr Gln Ala Ile Cys 
    690                 695                 700                 


Thr Leu Asp Gly Arg Leu Lys Phe Leu Pro Lys Met Ile Leu Glu Thr 
705                 710                 715                 720 


Pro Pro Pro Tyr Pro Cys Glu Phe Val Met Met Pro His Thr Pro Ala 
                725                 730                 735     


Pro Ser Val Gly Ala Glu Ser Asp Leu Thr Ile Gly Ser Val Thr Thr 
            740                 745                 750         


Glu Asp Val Pro Arg Ile Leu Glu Lys Ile Gly Asn Val Gly Glu Met 
        755                 760                 765             


Ala Asn Gln Gly Pro Leu Ala Phe Ser Glu Asp Lys Pro Val Asp Asp 
    770                 775                 780                 


Gln Leu Val Asn Asp Pro Arg Ile Ser Ser Arg Arg Pro Asp Glu Ser 
785                 790                 795                 800 


Thr Ser Ala Pro Ser Ala Gly Thr Gly Gly Ala Gly Ser Phe Thr Asp 
                805                 810                 815     


Leu Pro Pro Ser Asp Gly Ala Asp Ala Asp Gly Gly Gly Pro Phe Arg 
            820                 825                 830         


Thr Val Lys Arg Lys Ala Glu Arg Leu Phe Asp Gln Leu Ser Arg Gln 
        835                 840                 845             


Val Phe Asp Leu Val Ser His Leu Pro Val Phe Phe Ser Arg Leu Phe 
    850                 855                 860                 


Tyr Pro Gly Gly Gly Tyr Ser Pro Gly Asp Trp Gly Phe Ala Ala Phe 
865                 870                 875                 880 


Thr Leu Leu Cys Leu Phe Leu Cys Tyr Ser Tyr Pro Ala Phe Gly Ile 
                885                 890                 895     


Ala Pro Leu Leu Gly Val Phe Ser Gly Ser Ser Arg Arg Val Arg Met 
            900                 905                 910         


Gly Val Phe Gly Cys Trp Leu Ala Phe Ala Val Gly Leu Phe Lys Pro 
        915                 920                 925             


Val Ser Asp Pro Val Gly Ala Ala Cys Glu Phe Asp Ser Pro Glu Cys 
    930                 935                 940                 


Arg Asn Ile Leu His Ser Phe Glu Leu Leu Lys Pro Trp Asp Pro Val 
945                 950                 955                 960 


Arg Ser Leu Val Val Gly Pro Val Gly Leu Gly Leu Ala Ile Leu Gly 
                965                 970                 975     


Arg Leu Leu Gly 
            980 


<210>  8
<211>  980
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  8

Ala Gly Lys Arg Ala Arg Lys Ala Arg Ser Gly Ala Thr Thr Met Val 
1               5                   10                  15      


Ala His Arg Ala Ser Ser Ala His Glu Ile Gln Gln Ala Thr Lys His 
            20                  25                  30          


Glu Gly Ala Gly Ala Asn Lys Ala Glu His Leu Lys Leu Tyr Ser Pro 
        35                  40                  45              


Pro Ala Glu Gly Asn Cys Gly Trp His Cys Ile Ser Ala Ile Val Asn 
    50                  55                  60                  


Arg Met Val Asn Ser Asn Phe Glu Thr Thr Leu Pro Glu Arg Val Arg 
65                  70                  75                  80  


Pro Pro Asp Asp Trp Ala Thr Asp Glu Asp Leu Val Asn Thr Ile Gln 
                85                  90                  95      


Ile Leu Lys Leu Pro Ala Ala Leu Asp Arg Asn Gly Ala Cys Gly Gly 
            100                 105                 110         


Ala Lys Tyr Val Leu Lys Leu Glu Gly Glu His Trp Thr Val Ser Val 
        115                 120                 125             


Asn Pro Gly Met Ser Pro Ser Leu Leu Pro Leu Glu Cys Val Gln Gly 
    130                 135                 140                 


Cys Cys Glu His Lys Gly Gly Leu Gly Pro Pro Asp Ala Val Glu Val 
145                 150                 155                 160 


Ser Gly Phe Asp Pro Ala Cys Leu Asp Arg Leu Leu Gln Val Met His 
                165                 170                 175     


Leu Pro Ser Ser Thr Ile Pro Ala Ala Leu Ala Glu Leu Ser Asp Asp 
            180                 185                 190         


Ser Asn Arg Pro Val Ser Pro Ala Ala Ala Thr Trp Thr Val Ser Gln 
        195                 200                 205             


Ser Tyr Ala Arg His Arg Gly Gly Asn His His Asp Gln Val Cys Leu 
    210                 215                 220                 


Gly Lys Ile Ile Ser Leu Cys Gln Val Ile Glu Asp Cys Cys Cys His 
225                 230                 235                 240 


Gln Asn Lys Thr Asn Arg Ala Thr Pro Glu Glu Val Ala Ala Lys Ile 
                245                 250                 255     


Asp Gln Tyr Leu Arg Gly Ala Thr Ser Leu Glu Glu Cys Leu Ala Lys 
            260                 265                 270         


Leu Glu Arg Val Cys Pro Pro Gly Ala Ala Asp Thr Ser Phe Asp Trp 
        275                 280                 285             


Asn Val Val Leu Pro Gly Val Glu Ala Ala His Gln Thr Glu Lys Gln 
    290                 295                 300                 


Leu His Val Asn Pro Cys Arg Thr Leu Val Pro Pro Val Thr Gln Glu 
305                 310                 315                 320 


Pro Leu Gly Lys Asp Ser Val Pro Leu Thr Ala Phe Ser Leu Ser Asn 
                325                 330                 335     


Cys Tyr Tyr Pro Ala Gln Gly Asn Glu Val Arg His Arg Glu Arg Leu 
            340                 345                 350         


Asn Ser Val Leu Ser Lys Leu Glu Glu Val Val Leu Glu Glu Tyr Gly 
        355                 360                 365             


Leu Met Ser Thr Gly Leu Gly Pro Arg Pro Val Leu Pro Ser Gly Leu 
    370                 375                 380                 


Val Glu Leu Lys Asp Gln Met Glu Glu Asp Leu Leu Lys Leu Val Asn 
385                 390                 395                 400 


Thr Gln Ala Thr Ser Glu Met Met Ala Trp Ala Ala Glu Gln Val Asp 
                405                 410                 415     


Leu Lys Ala Trp Val Lys Ser Tyr Pro Arg Trp Thr Pro Pro Pro Pro 
            420                 425                 430         


Pro Pro Arg Val Gln Pro Arg Lys Thr Lys Ser Val Lys Ser Leu Pro 
        435                 440                 445             


Glu Asp Lys Pro Val Pro Ala Pro Arg Arg Lys Val Arg Ser Gly Cys 
    450                 455                 460                 


Gly Ser Pro Val Leu Met Gly Asp Asn Val Pro Asn Gly Arg Glu Asp 
465                 470                 475                 480 


Leu Thr Val Gly Gly Pro Leu Asn Phe Pro Thr Pro Ser Glu Pro Met 
                485                 490                 495     


Thr Pro Met Ser Glu Pro Val Leu Thr Pro Ala Leu Gln Arg Val Pro 
            500                 505                 510         


Lys Leu Met Thr Pro Leu Asp Gly Ser Ala Pro Val Pro Ala Pro Arg 
        515                 520                 525             


Arg Thr Val Ser Arg Pro Met Thr Pro Leu Ser Glu Pro Ile Phe Leu 
    530                 535                 540                 


Ser Ala Pro Arg His Lys Phe Gln Gln Val Glu Glu Ala Asn Pro Ala 
545                 550                 555                 560 


Thr Thr Thr Leu Thr His Gln Asn Glu Pro Leu Asp Leu Ser Ala Ser 
                565                 570                 575     


Ser Gln Thr Glu Tyr Glu Ala Ser Pro Leu Ala Ser Ser Gln Asn Met 
            580                 585                 590         


Ser Ile Leu Glu Ala Gly Gly Gln Glu Ala Glu Glu Val Leu Ser Glu 
        595                 600                 605             


Ile Ser Asp Ile Leu Asn Asp Thr Ser Pro Ala Pro Val Ser Ser Ser 
    610                 615                 620                 


Ser Ser Leu Ser Ser Val Lys Ile Thr Arg Pro Lys Tyr Ser Ala Gln 
625                 630                 635                 640 


Ala Ile Ile Asp Ser Gly Gly Pro Cys Ser Gly His Leu Gln Lys Val 
                645                 650                 655     


Lys Glu Ala Cys Leu Ser Ile Met Arg Glu Ala Cys Asp Ala Ser Lys 
            660                 665                 670         


Leu Ser Asp Pro Ala Thr Gln Glu Trp Leu Ser Arg Met Trp Asp Arg 
        675                 680                 685             


Val Asp Met Leu Thr Trp Arg Asn Thr Ser Ala Tyr Gln Phe Arg Thr 
    690                 695                 700                 


Leu Asn Asp Gly Arg Phe Glu Phe Leu Pro Lys Met Ile Leu Glu Thr 
705                 710                 715                 720 


Pro Pro Pro His Pro Cys Gly Phe Val Met Leu Pro His Thr Pro Ala 
                725                 730                 735     


Pro Ser Val Ser Ala Glu Ser Asp Leu Thr Ile Gly Ser Val Ala Thr 
            740                 745                 750         


Glu Asp Val Pro Arg Ile Leu Gly Lys Ile Gly Asp Thr Gly Glu Leu 
        755                 760                 765             


Leu Asn Gln Gly Pro Ser Ala Pro Phe Lys Gly Gly Pro Val Cys Asp 
    770                 775                 780                 


Gln Pro Ala Lys Asn Ser Arg Met Ser Pro Arg Glu Ser Asp Glu Ser 
785                 790                 795                 800 


Ile Ile Ala Pro Pro Ala Asp Thr Gly Gly Ala Gly Ser Phe Thr Asp 
                805                 810                 815     


Leu Pro Ser Ser Asp Ser Val Asp Ala Asn Gly Gly Gly Pro Leu Arg 
            820                 825                 830         


Thr Val Lys Thr Lys Ala Gly Arg Leu Leu Asp Gln Leu Ser Cys Gln 
        835                 840                 845             


Val Phe Ser Leu Val Ser His Leu Pro Val Phe Phe Ser His Leu Phe 
    850                 855                 860                 


Lys Ser Asp Ser Gly Tyr Ser Pro Gly Asp Trp Gly Phe Ala Ala Phe 
865                 870                 875                 880 


Thr Leu Phe Cys Leu Phe Leu Cys Tyr Ser Tyr Pro Phe Phe Gly Phe 
                885                 890                 895     


Ala Pro Leu Leu Gly Val Phe Ser Gly Ser Ser Arg Arg Val Arg Met 
            900                 905                 910         


Gly Val Phe Gly Cys Trp Leu Ala Phe Ala Val Gly Leu Phe Lys Pro 
        915                 920                 925             


Val Ser Asp Pro Val Gly Thr Ala Cys Glu Phe Asp Ser Pro Glu Cys 
    930                 935                 940                 


Arg Asn Val Leu His Ser Phe Glu Leu Leu Lys Pro Trp Asp Pro Val 
945                 950                 955                 960 


Arg Ser Leu Val Val Gly Pro Val Gly Leu Gly Leu Ala Ile Leu Gly 
                965                 970                 975     


Arg Leu Leu Gly 
            980 


<210>  9
<211>  259
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  9

Ser Leu Thr Gly Ala Leu Ala Met Arg Leu Asn Asp Glu Asp Leu Asp 
1               5                   10                  15      


Phe Leu Thr Lys Trp Thr Asp Phe Lys Cys Phe Val Ser Ala Ser Asn 
            20                  25                  30          


Met Arg Asn Ala Ala Gly Gln Phe Ile Glu Ala Ala Tyr Ala Lys Ala 
        35                  40                  45              


Leu Arg Val Glu Leu Ala Gln Leu Val Gln Val Asp Lys Val Arg Gly 
    50                  55                  60                  


Thr Leu Ala Lys Leu Glu Ala Phe Ala Asp Thr Val Ala Pro Gln Leu 
65                  70                  75                  80  


Ser Pro Gly Asp Ile Val Val Ala Leu Gly His Thr Pro Val Gly Ser 
                85                  90                  95      


Ile Phe Asp Leu Lys Val Gly Ser Thr Lys His Thr Leu Gln Ala Ile 
            100                 105                 110         


Glu Thr Arg Val Leu Ala Gly Ser Lys Met Thr Val Ala Arg Val Val 
        115                 120                 125             


Asp Pro Thr Pro Thr Pro Pro Pro Ala Pro Val Pro Ile Pro Leu Pro 
    130                 135                 140                 


Pro Lys Val Leu Glu Asn Gly Pro Asn Ala Trp Gly Asp Glu Asp Arg 
145                 150                 155                 160 


Leu Asn Lys Lys Lys Arg Arg Arg Met Glu Ala Leu Gly Ile Tyr Val 
                165                 170                 175     


Met Gly Gly Lys Lys Tyr Gln Lys Phe Trp Asp Lys Asn Ser Gly Asp 
            180                 185                 190         


Val Phe Tyr Glu Glu Val His Asn Asn Thr Asp Glu Trp Glu Cys Leu 
        195                 200                 205             


Arg Val Gly Asp Pro Ala Asp Phe Asp Pro Glu Lys Gly Thr Leu Cys 
    210                 215                 220                 


Gly His Val Thr Ile Glu Asn Lys Ala Tyr His Val Tyr Thr Ser Pro 
225                 230                 235                 240 


Ser Gly Lys Lys Phe Leu Val Pro Val Asn Pro Glu Asn Gly Arg Val 
                245                 250                 255     


Gln Trp Glu 
            


<210>  10
<211>  259
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  10

Ser Leu Thr Gly Ala Leu Ala Met Arg Leu Asn Asp Glu Asp Leu Asp 
1               5                   10                  15      


Phe Leu Met Lys Trp Thr Asp Phe Lys Cys Phe Val Ser Ala Ser Asn 
            20                  25                  30          


Met Arg Asn Ala Ala Gly Gln Phe Ile Glu Ala Ala Tyr Ala Lys Ala 
        35                  40                  45              


Leu Arg Val Glu Leu Ala Gln Leu Val Gln Val Asp Lys Val Arg Gly 
    50                  55                  60                  


Thr Leu Ala Lys Leu Glu Ala Phe Ala Asp Thr Val Ala Pro Gln Leu 
65                  70                  75                  80  


Ser Pro Gly Asp Ile Val Val Ala Leu Gly His Thr Pro Val Gly Ser 
                85                  90                  95      


Ile Phe Asp Leu Lys Val Gly Ser Thr Lys His Thr Leu Gln Ala Ile 
            100                 105                 110         


Glu Thr Arg Val Leu Ala Gly Ser Lys Met Thr Val Ala Arg Val Val 
        115                 120                 125             


Asp Pro Thr Pro Thr Pro Pro Pro Ala Pro Val Pro Ile Pro Leu Pro 
    130                 135                 140                 


Pro Lys Val Leu Glu Asn Gly Pro Asn Ala Trp Gly Asp Glu Asp Arg 
145                 150                 155                 160 


Leu Asn Lys Lys Lys Arg Arg Arg Met Glu Ala Leu Gly Ile Tyr Val 
                165                 170                 175     


Met Gly Gly Lys Lys Tyr Gln Lys Phe Trp Asp Lys Asn Ser Gly Asp 
            180                 185                 190         


Val Phe Tyr Glu Glu Val His Asn Asn Thr Asp Glu Trp Glu Cys Leu 
        195                 200                 205             


Arg Val Gly Asp Pro Ala Asp Phe Asp Pro Glu Lys Gly Thr Leu Cys 
    210                 215                 220                 


Gly His Val Thr Ile Glu Asn Lys Ala Tyr His Val Tyr Thr Ser Pro 
225                 230                 235                 240 


Ser Gly Lys Lys Phe Leu Val Pro Val Asn Pro Glu Asn Gly Arg Val 
                245                 250                 255     


Gln Trp Glu 
            


<210>  11
<211>  259
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  11

Ser Leu Thr Gly Ala Leu Ala Met Arg Leu Asn Asp Glu Asp Leu Asp 
1               5                   10                  15      


Phe Leu Met Lys Trp Thr Asp Phe Lys Cys Phe Val Ser Ala Ser Asn 
            20                  25                  30          


Met Arg Asn Ala Ala Gly Gln Phe Ile Glu Ala Ala Tyr Ala Lys Ala 
        35                  40                  45              


Leu Arg Val Glu Leu Ala Gln Leu Val Gln Val Asp Lys Val Arg Gly 
    50                  55                  60                  


Thr Leu Ala Lys Leu Glu Ala Phe Ala Asp Thr Val Ala Pro Gln Leu 
65                  70                  75                  80  


Ser Pro Gly Asp Ile Val Val Ala Leu Gly His Thr Pro Val Gly Ser 
                85                  90                  95      


Ile Phe Asp Leu Lys Val Gly Ser Thr Lys His Thr Leu Gln Ala Ile 
            100                 105                 110         


Glu Thr Arg Val Leu Ala Gly Ser Lys Met Thr Val Ala Arg Val Val 
        115                 120                 125             


Asp Pro Thr Pro Thr Pro Pro Pro Ala Pro Val Pro Ile Pro Leu Pro 
    130                 135                 140                 


Pro Lys Val Leu Glu Asn Gly Pro Asn Ala Trp Gly Asp Glu Asp Arg 
145                 150                 155                 160 


Leu Asn Lys Lys Lys Arg Arg Arg Met Glu Ala Leu Gly Ile Tyr Val 
                165                 170                 175     


Met Gly Gly Lys Lys Tyr Gln Lys Phe Trp Asp Lys Asn Ser Gly Asp 
            180                 185                 190         


Val Phe Tyr Glu Glu Val His Asn Asn Thr Asp Glu Trp Glu Cys Leu 
        195                 200                 205             


Arg Val Gly Asp Pro Ala Asp Phe Asp Pro Glu Lys Gly Thr Leu Cys 
    210                 215                 220                 


Gly His Val Thr Ile Glu Asn Lys Ala Tyr His Val Tyr Thr Ser Pro 
225                 230                 235                 240 


Ser Gly Lys Lys Phe Leu Val Pro Val Asn Pro Glu Asn Gly Arg Val 
                245                 250                 255     


Gln Trp Glu 
            


<210>  12
<211>  259
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  12

Ser Leu Thr Gly Ala Leu Ala Met Arg Leu Asn Asp Glu Asp Leu Asp 
1               5                   10                  15      


Phe Leu Met Lys Trp Thr Asp Phe Lys Cys Phe Val Ser Ala Ser Asn 
            20                  25                  30          


Met Arg Asn Ala Ala Gly Gln Phe Ile Glu Ala Ala Tyr Ala Lys Ala 
        35                  40                  45              


Leu Arg Val Glu Leu Ala Gln Leu Val Gln Val Asp Lys Val Arg Gly 
    50                  55                  60                  


Thr Leu Ala Lys Leu Glu Ala Phe Ala Asp Thr Val Ala Pro Gln Leu 
65                  70                  75                  80  


Ser Pro Gly Asp Ile Val Val Ala Leu Arg His Thr Pro Val Gly Ser 
                85                  90                  95      


Ile Phe Asp Leu Lys Val Gly Ile Thr Lys His Thr Leu Gln Ala Ile 
            100                 105                 110         


Glu Thr Arg Val Leu Ala Gly Ser Lys Met Thr Val Ala Arg Val Val 
        115                 120                 125             


Asp Pro Thr Pro Thr Pro Pro Pro Ala Pro Val Pro Ile Pro Leu Pro 
    130                 135                 140                 


Pro Lys Val Leu Glu Asn Gly Pro Asn Ala Trp Gly Asp Glu Asp Arg 
145                 150                 155                 160 


Leu Asn Lys Lys Lys Arg Arg Arg Met Glu Ala Leu Gly Ile Tyr Val 
                165                 170                 175     


Met Gly Gly Lys Lys Tyr Gln Lys Phe Trp Asp Lys Asn Ser Gly Asp 
            180                 185                 190         


Val Phe Tyr Glu Glu Val His Asn Asn Thr Asp Glu Trp Glu Cys Leu 
        195                 200                 205             


Arg Val Gly Asp Pro Ala Asp Phe Asp Pro Glu Lys Gly Thr Leu Cys 
    210                 215                 220                 


Gly His Val Thr Ile Glu Asn Lys Ala Tyr His Val Tyr Thr Ser Pro 
225                 230                 235                 240 


Ser Gly Lys Lys Phe Leu Val Pro Val Asn Pro Glu Asn Gly Arg Val 
                245                 250                 255     


Gln Trp Glu 
            


<210>  13
<211>  259
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  13

Ser Leu Thr Gly Ala Leu Ala Met Arg Leu Asn Asp Glu Asp Leu Asp 
1               5                   10                  15      


Phe Leu Met Lys Trp Thr Asp Phe Lys Cys Phe Val Ser Ala Ser Asn 
            20                  25                  30          


Met Arg Asn Ala Ala Gly Gln Phe Ile Glu Ala Ala Tyr Ala Lys Ala 
        35                  40                  45              


Leu Arg Val Glu Leu Ala Gln Leu Val Gln Val Asp Lys Val Arg Gly 
    50                  55                  60                  


Val Leu Ala Lys Leu Glu Ala Phe Ala Asp Thr Val Ala Pro Gln Leu 
65                  70                  75                  80  


Ser Pro Gly Asp Ile Val Val Ala Leu Gly His Thr Pro Val Gly Ser 
                85                  90                  95      


Ile Phe Asp Leu Lys Val Gly Ser Thr Lys His Thr Leu Gln Ala Ile 
            100                 105                 110         


Glu Thr Arg Val Leu Ala Gly Ser Lys Met Thr Val Ala Arg Val Val 
        115                 120                 125             


Asp Pro Thr Pro Thr Pro Pro Pro Ala Pro Val Pro Ile Pro Leu Pro 
    130                 135                 140                 


Pro Lys Val Leu Glu Asn Gly Pro Asn Ala Trp Gly Asp Glu Asp Arg 
145                 150                 155                 160 


Leu Asn Lys Lys Lys Arg Arg Arg Met Glu Ala Leu Gly Ile Tyr Val 
                165                 170                 175     


Met Gly Gly Lys Lys Tyr Gln Lys Phe Trp Asp Lys Asn Ser Gly Asp 
            180                 185                 190         


Val Phe Tyr Glu Glu Val His Asn Asn Thr Asp Glu Trp Glu Cys Leu 
        195                 200                 205             


Arg Val Gly Asp Pro Ala Asp Phe Asp Pro Glu Lys Gly Thr Leu Cys 
    210                 215                 220                 


Gly His Val Thr Ile Glu Asn Lys Ala Tyr His Val Tyr Ile Ser Pro 
225                 230                 235                 240 


Ser Gly Lys Lys Phe Leu Val Pro Val Asn Pro Glu Asn Gly Arg Val 
                245                 250                 255     


Gln Trp Glu 
            


<210>  14
<211>  259
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  14

Ser Leu Thr Gly Ala Leu Ala Met Arg Leu Asn Asp Glu Asp Leu Asp 
1               5                   10                  15      


Phe Leu Thr Lys Trp Thr Asp Phe Lys Cys Phe Val Ser Ala Ser Asn 
            20                  25                  30          


Met Arg Asn Ala Ala Gly Gln Phe Ile Glu Ala Ala Tyr Ala Lys Ala 
        35                  40                  45              


Leu Arg Val Glu Leu Ala Gln Leu Val Gln Val Asp Lys Val Arg Gly 
    50                  55                  60                  


Thr Leu Ala Lys Leu Glu Ala Phe Ala Asp Thr Val Ala Pro Gln Leu 
65                  70                  75                  80  


Ser Pro Gly Asp Ile Val Val Ala Leu Gly His Thr Pro Val Gly Ser 
                85                  90                  95      


Ile Phe Asp Leu Lys Val Gly Asn Thr Lys His Thr Leu Gln Ala Ile 
            100                 105                 110         


Glu Thr Arg Val Leu Ala Gly Ser Lys Met Thr Val Ala Arg Val Val 
        115                 120                 125             


Asp Pro Thr Pro Thr Leu Pro Pro Ala Pro Val Pro Ile Pro Leu Pro 
    130                 135                 140                 


Pro Lys Val Leu Glu Asn Gly Pro Asn Ala Trp Gly Asp Glu Asp Arg 
145                 150                 155                 160 


Leu Asn Lys Lys Arg Arg Arg Arg Met Glu Ala Leu Gly Ile Tyr Val 
                165                 170                 175     


Met Gly Gly Lys Lys Tyr Gln Lys Phe Trp Asp Lys Asn Ser Gly Asp 
            180                 185                 190         


Val Phe Tyr Glu Glu Val His Asn Asn Thr Asp Glu Trp Glu Cys Leu 
        195                 200                 205             


Arg Val Gly Asp Pro Ala Asp Phe Asp Pro Glu Lys Gly Thr Leu Cys 
    210                 215                 220                 


Gly His Val Thr Ile Glu Asp Arg Ala Tyr His Val Tyr Thr Ser Pro 
225                 230                 235                 240 


Ser Gly Lys Lys Phe Leu Val Pro Val Asn Pro Glu Asn Gly Arg Val 
                245                 250                 255     


Gln Trp Glu 
            


<210>  15
<211>  259
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  15

Ser Leu Thr Gly Ala Leu Ala Met Arg Leu Thr Asp Glu Asp Leu Asp 
1               5                   10                  15      


Phe Leu Thr Lys Trp Thr Asp Phe Lys Cys Phe Val Ser Ala Ser Asn 
            20                  25                  30          


Met Arg Asn Ala Ala Gly Gln Phe Ile Glu Ala Ala Tyr Ala Lys Ala 
        35                  40                  45              


Leu Arg Val Ile Leu Ala Gln Leu Val Gln Val Asp Lys Val Arg Gly 
    50                  55                  60                  


Thr Met Ala Lys Leu Glu Ala Phe Ala Asp Thr Val Ala Pro Gln Leu 
65                  70                  75                  80  


Ser Pro Gly Asp Ile Val Val Ala Leu Gly His Thr Pro Val Gly Ser 
                85                  90                  95      


Ile Phe Asp Leu Lys Val Gly Ser Thr Lys His Thr Leu Gln Ala Ile 
            100                 105                 110         


Glu Thr Arg Val Leu Ala Gly Ser Lys Met Thr Val Ala Arg Val Val 
        115                 120                 125             


Asp Pro Thr Pro Ala Pro Pro Pro Val Pro Val Pro Ile Pro Leu Pro 
    130                 135                 140                 


Pro Lys Val Leu Glu Asn Gly Pro Asn Ala Trp Gly Asp Glu Asp Arg 
145                 150                 155                 160 


Leu Asn Lys Lys Lys Arg Arg Arg Met Glu Ala Val Gly Ile Phe Val 
                165                 170                 175     


Met Asp Gly Lys Lys Tyr Gln Lys Phe Trp Asp Lys Asn Ser Gly Asp 
            180                 185                 190         


Val Phe Tyr Glu Glu Val His Ile Ser Thr Asp Glu Trp Glu Cys Leu 
        195                 200                 205             


Arg Thr Gly Asp Pro Val Asp Phe Asp Pro Glu Thr Gly Ile Gln Cys 
    210                 215                 220                 


Gly His Ile Thr Ile Glu Asp Lys Val Tyr Asn Val Phe Thr Ser Pro 
225                 230                 235                 240 


Ser Gly Arg Arg Phe Leu Val Pro Ala Asn Pro Glu Asn Arg Arg Ala 
                245                 250                 255     


Gln Trp Glu 
            


<210>  16
<211>  259
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  16

Ser Leu Thr Gly Ala Leu Ala Met Lys Leu Ser Asp Glu Asp Leu Asp 
1               5                   10                  15      


Phe Leu Thr Lys Leu Thr Asp Phe Lys Cys Phe Val Ser Ala Ser Asn 
            20                  25                  30          


Met Arg Asn Ala Ala Gly Gln Phe Ile Glu Ala Ala Tyr Ala Lys Ile 
        35                  40                  45              


Leu Arg Val Glu Leu Ala Gln Leu Val Gln Val Asp Lys Val Arg Gly 
    50                  55                  60                  


Val Leu Ala Lys Leu Glu Ala Phe Ala Asp Thr Val Ala Pro His Leu 
65                  70                  75                  80  


Ser Pro Gly Asp Ile Val Val Val Leu Gly His Thr Pro Val Gly Ser 
                85                  90                  95      


Ile Phe Asp Leu Lys Ile Gly Asn Ala Lys His Thr Leu Gln Ala Ile 
            100                 105                 110         


Glu Thr Arg Val Leu Ala Gly Ser Arg Met Thr Val Ala Arg Val Val 
        115                 120                 125             


Asp Pro Thr Pro Ala Pro Pro Pro Val Pro Val Pro Val Pro Leu Pro 
    130                 135                 140                 


Pro Lys Val Leu Glu Asn Gly Pro Ser Ala Trp Gly Asp Glu Asp Arg 
145                 150                 155                 160 


Leu Asn Lys Lys Lys Arg Arg Lys Met Glu Ala Val Gly Ile Tyr Val 
                165                 170                 175     


Met Gly Gly Lys Lys Tyr Gln Lys Phe Trp Asp Lys Asn Ser Gly Asp 
            180                 185                 190         


Val Phe Tyr Glu Glu Val His Asp Asn Thr Asp Ala Trp Glu Cys Leu 
        195                 200                 205             


Arg Ala Asp Asp Pro Ala Asp Leu Asp Pro Glu Arg Gly Thr Leu Cys 
    210                 215                 220                 


Gly His Val Thr Ile Glu Asn Arg Pro Tyr His Val Tyr Ala Ser Pro 
225                 230                 235                 240 


Ser Gly Arg Lys Phe Leu Val Pro Ala Asp Pro Glu Asn Gly Lys Ala 
                245                 250                 255     


Gln Trp Glu 
            


<210>  17
<211>  259
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  17

Ser Leu Thr Gly Ala Leu Ala Met Arg Leu Asn Asp Glu Asp Leu Asp 
1               5                   10                  15      


Phe Leu Thr Lys Trp Thr Asp Phe Lys Cys Phe Val Ser Ala Ser Asn 
            20                  25                  30          


Met Arg Asn Ala Ala Gly Gln Phe Ile Glu Ala Ala Tyr Ala Lys Ala 
        35                  40                  45              


Leu Arg Val Ile Leu Ala Gln Leu Val Gln Val Asp Lys Val Arg Gly 
    50                  55                  60                  


Thr Leu Ala Lys Leu Glu Ala Phe Ala Asp Thr Val Ala Pro Gln Leu 
65                  70                  75                  80  


Ser Pro Gly Asp Ile Val Val Ala Leu Gly His Thr Pro Val Gly Ser 
                85                  90                  95      


Ile Phe Asp Leu Lys Val Gly Gly Thr Lys His Thr Leu Gln Val Ile 
            100                 105                 110         


Glu Thr Arg Val Leu Ala Gly Ser Lys Met Thr Val Ala Arg Val Val 
        115                 120                 125             


Asp Pro Thr Pro Thr Pro Pro Pro Ala Pro Val Pro Ile Pro Leu Pro 
    130                 135                 140                 


Pro Lys Val Leu Glu Asn Gly Pro Asn Ala Trp Gly Asp Gly Asp Arg 
145                 150                 155                 160 


Leu Asn Lys Lys Lys Arg Arg Arg Met Glu Thr Val Gly Ile Phe Val 
                165                 170                 175     


Met Gly Gly Lys Lys Tyr Gln Lys Phe Trp Asp Lys Asn Ser Gly Asp 
            180                 185                 190         


Val Phe Tyr Glu Glu Val His Asp Asn Thr Asp Ala Trp Glu Cys Leu 
        195                 200                 205             


Arg Val Gly Asp Pro Ala Asp Phe Asp Pro Glu Lys Gly Thr Leu Cys 
    210                 215                 220                 


Gly His Thr Thr Ile Glu Asp Lys Asp Tyr Lys Val Tyr Ile Ser Pro 
225                 230                 235                 240 


Ser Gly Lys Lys Phe Leu Val Pro Val Asn Ser Glu Ser Gly Arg Ala 
                245                 250                 255     


Gln Trp Glu 
            


<210>  18
<211>  259
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  18

Ser Leu Thr Gly Ala Leu Ala Met Arg Leu Asn Asp Glu Asp Leu Asp 
1               5                   10                  15      


Phe Leu Met Lys Trp Thr Asp Phe Lys Cys Phe Val Ser Ala Ser Asn 
            20                  25                  30          


Met Arg Asn Ala Ala Gly Gln Phe Ile Glu Ala Ala Tyr Ala Lys Ala 
        35                  40                  45              


Leu Arg Val Glu Leu Ala Gln Leu Val Gln Val Asp Lys Val Arg Gly 
    50                  55                  60                  


Val Leu Ala Lys Leu Glu Ala Phe Ala Asp Thr Val Ala Pro Gln Leu 
65                  70                  75                  80  


Ser Pro Gly Asp Ile Val Val Ala Leu Gly His Thr Pro Val Gly Ser 
                85                  90                  95      


Ile Phe Asp Leu Lys Val Gly Ser Thr Lys His Thr Leu Gln Ala Ile 
            100                 105                 110         


Glu Thr Arg Val Leu Ala Gly Ser Lys Met Thr Val Ala Arg Val Val 
        115                 120                 125             


Asp Pro Thr Pro Thr Pro Pro Pro Ala Pro Val Pro Ile Pro Leu Pro 
    130                 135                 140                 


Pro Lys Val Leu Glu Asn Gly Pro Asn Ala Trp Gly Asp Glu Asp Arg 
145                 150                 155                 160 


Leu Asn Lys Lys Lys Arg Arg Arg Met Glu Ala Leu Gly Ile Tyr Val 
                165                 170                 175     


Met Gly Gly Lys Lys Tyr Gln Lys Phe Trp Asp Lys Asn Ser Gly Asp 
            180                 185                 190         


Val Phe Tyr Glu Glu Val His Asn Asn Thr Asp Glu Trp Glu Cys Leu 
        195                 200                 205             


Arg Val Gly Asp Pro Ala Asp Phe Asp Pro Glu Lys Gly Thr Leu Cys 
    210                 215                 220                 


Gly His Val Thr Ile Glu Asn Lys Ala Tyr His Val Tyr Ile Ser Pro 
225                 230                 235                 240 


Ser Gly Lys Lys Phe Leu Val Pro Val Asn Pro Glu Asn Gly Arg Val 
                245                 250                 255     


Gln Trp Glu 
            


<210>  19
<211>  259
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  19

Ser Leu Thr Gly Ala Leu Ala Met Arg Leu Thr Asp Glu Asp Leu Asp 
1               5                   10                  15      


Phe Leu Thr Lys Trp Thr Asp Phe Lys Cys Phe Val Ser Ala Ser Asn 
            20                  25                  30          


Met Arg Asn Ala Ala Gly Gln Phe Ile Glu Ala Ala Tyr Ala Lys Ala 
        35                  40                  45              


Leu Arg Val Ile Leu Ala Gln Leu Val Gln Val Asp Lys Val Arg Gly 
    50                  55                  60                  


Thr Met Ala Lys Leu Glu Ala Phe Ala Asp Thr Val Ala Pro Gln Leu 
65                  70                  75                  80  


Ser Pro Gly Asp Ile Val Val Ala Leu Gly His Thr Pro Val Gly Ser 
                85                  90                  95      


Ile Phe Asp Leu Lys Val Gly Ser Thr Lys His Thr Leu Gln Ala Ile 
            100                 105                 110         


Glu Thr Arg Val Leu Ala Gly Ser Lys Met Thr Val Ala Arg Val Val 
        115                 120                 125             


Asp Pro Thr Pro Ala Pro Pro Pro Val Pro Val Pro Ile Pro Leu Pro 
    130                 135                 140                 


Pro Lys Val Leu Glu Asn Gly Pro Asn Ala Trp Gly Asp Glu Asp Arg 
145                 150                 155                 160 


Leu Asn Lys Lys Lys Arg Arg Arg Met Glu Ala Val Gly Ile Phe Val 
                165                 170                 175     


Met Asp Gly Lys Lys Tyr Gln Lys Phe Trp Asp Lys Asn Ser Gly Asp 
            180                 185                 190         


Val Phe Tyr Glu Glu Val His Ile Ser Thr Asp Glu Trp Glu Cys Leu 
        195                 200                 205             


Arg Thr Gly Asp Pro Val Asp Phe Asp Pro Glu Thr Gly Ile Gln Cys 
    210                 215                 220                 


Gly His Ile Thr Ile Glu Asp Lys Val Tyr Asn Val Phe Thr Ser Pro 
225                 230                 235                 240 


Ser Gly Arg Arg Phe Leu Val Pro Ala Asn Pro Glu Asn Arg Arg Ala 
                245                 250                 255     


Gln Trp Glu 
            


<210>  20
<211>  807
<212>  DNA
<213>  Porcine reproductive and respiratory syndrome virus

<400>  20
tccctgacgg ctgctctagc ttgcaagttg tcgcaggctg accttgattt tttgtccagc       60

ttaacgaact tcaagtgctt tgtatctgct tcaaacatga aaaatgctgc cggccagtac      120

attgaagcag cttatgccaa ggccctgcgc caagagttgg cctctctagt tcaggttgac      180

aaaatgaaag gaattttgtc caagctcgag gcctttgctg aaacagccac cccgtccctt      240

gacacaggtg acgtggttgt tctgcttggg caacatcctc acggatccat cctcgatatt      300

aatgtgggga ctgaaaggaa aactgtgtcc gtgcaagaga cccggagcct aggcggctcc      360

aaattcagtg tttgcactgt cgtgtccaac acacccgtgg acgccttaac cggcatccca      420

ctccagacac caacccctct ttttgagaat ggtccgcgtc atcgcggtga ggaagacgat      480

cttaaagtcg agaggatgaa gaaacactgt gtgtccctcg gcttccacaa catcaatggc      540

aaagtttact gcaaaatttg ggacaagtct accggtgaca ccttttacac cgatgattcc      600

cggtacaccc aagaccatgc ttttcaggac aggtcagccg actacagaga cagggactat      660

gagggtgtgc aaaccgcccc ccaacagggc tttgatccaa agtctgaaac ccctgttggc      720

actgtagtga tcggcggtat tacgtataac aggtacctga tcaaaggtaa ggaggtcctg      780

gttcccaagc ctgacaactg ccttgaa                                          807


<210>  21
<211>  807
<212>  DNA
<213>  Porcine reproductive and respiratory syndrome virus

<400>  21
tccctaacgg ctgctttagc ttgcaagttg tcacaggctg accttgattt tttgtccagc       60

ttaacgaact tcaagtgctt tgtatctgct tcaaacatga aaaatgctgc cggccagtac      120

attgaagcag cgtatgccaa ggccctgcgc caagagttgg cctctctagt tcagattgac      180

aaaatgaaag gagttttgtc caagctcgag gcctttgctg aaacagccac cccgtccctt      240

gacataggtg acgtgattgt tctgcttggg caacatcctc acggatccat cctcgatatt      300

aatgtgggga ctgaaaggaa aactgtgtcc gtgcaagaga cccggagcct aggcggctcc      360

aaattcagtg tttgtactgt cgtgtccaac acacccgtgg acgccttgac cggcatccca      420

ctccagacac caacccctct ttttgagaat ggtccgcgtc atcgcagcga ggaagacgat      480

cttaaagtcg agaggatgaa gaaacactgt gtatccctcg gcttccacaa catcaatggc      540

aaagtttact gcaaaatttg ggacaagtct accggtgaca ccttttacac ggatgattcc      600

cggtacaccc aagaccatgc ttttcaggac aggtcagccg actacagaga cagggactat      660

gagggtgtgc aaaccacccc ccaacaggga tttgatccaa agtctgaaac ccctgttggc      720

actgttgtga tcggcggtat tacgtataac aggtatctga tcaaaggtaa ggaggttctg      780

gtccccaagc ctgacaactg ccttgaa                                          807


<210>  22
<211>  807
<212>  DNA
<213>  Porcine reproductive and respiratory syndrome virus

<400>  22
tctctgacgg ctgctctggc ttgcaagttg tcgcaggctg atcttgaatt tttgtccagt       60

ttaacgaact tcaagtgctt tgtgtctgct tcaaatatga aaaatgccgc cggccagtac      120

attgaagcag cttatgccaa ggccttgcgc caagagttgg cctctctagt tcaggttgat      180

aaaatgaaag gagttttgtc caagctcgag gcctttgctg aaacagccac cccgtccctt      240

gacacaggtg acgtggttgt tttgcttggg cagcatcctc acgggtctat cctcgatatt      300

aatgtgggga ctgaaaggaa aactgtgtcc gtgcaagaga cccggaacct aggcggctcc      360

aaattcagtg tttgcactgt cgtgtccaac acacccgtgg acgccttaac cggcatccca      420

ctccggacac caacccctct ttttgagaat ggtccgcgtc atcgcggtga ggaagacgat      480

ctcaaagtcg agaggatgaa gaaacactgt gtatccctcg gcttccacaa catcaatggc      540

aaagtctact gtaagatctg ggataagtct accggtgaca ccttttacac cgacgattcc      600

cggtataccc acgaccatgc ttttcaggac aggtcagccg actacagaga cagggactac      660

gaaggtgtgc aaaccgcccc ccaacaaggc tttgatccaa agtctgaaac ccctgttggc      720

actgtagtga tcggcggtat cacgtataac aggtacctga ttagaggtaa ggaggtcctg      780

gtccccaagc ctgacaactg ccctgaa                                          807


<210>  23
<211>  807
<212>  DNA
<213>  Porcine reproductive and respiratory syndrome virus

<400>  23
tccctgacgg ctgctctagc ctgcaagttg tcgcaggctg atcttgactt cttgttcagc       60

ttgacgaacc tcaagtgcgt tgtatctgct tccaacatga aaaatgctgc tggccagtac      120

attgaagcag ctaatgctaa ggccctgcgc caagagttgg cttctctggt tcaagttgac      180

aaattgaaag gaattttgtc caagctcgag gcctttgctg aaacagccac cccgtcccct      240

gacacaggtg acgtggttgt tctgccttgg caacatcctc acggatccat cctcgatatt      300

aatgtgggga ctgaaaggaa aactgtgtcc gtgcaagaga cccggagcct aggtgtttcc      360

aaattcagtg tttgcactgt cgtgtccaac acacccgtgg acgccttaac tggcatccca      420

ctccagatac cggcacctct ttttgagaat ggtccgcgtc atcgtggcga ggaagatgat      480

cttaaagttg agaggaagga gaaacactgt gtgtctctcg gcttccacaa catcaatggc      540

aaagtttact gtaaaatttg ggacaagtct accggtgaca cattttacac cgacgattcc      600

cggtacaccc aagatcatgc ttttcaggac aggtcagctg actacagaga cagggactat      660

gagggtatgc gaaccgcccc ccaacaggga tttgatccaa agtctgaaac ccctgttggc      720

actgttgtga tcggcggtat tacgtataac aggtacttga tcaaaggtaa ggaggtcctg      780

gttcccaagc ctgacaactg ccttgaa                                          807


<210>  24
<211>  807
<212>  DNA
<213>  Porcine reproductive and respiratory syndrome virus

<400>  24
tccctgacgg ctgctctagc ttgcaagttg tcgcaggctg accttgactt tttgtccagc       60

ttaacgaact tcaagtgctt tgtatctgct tcaaacatga aaaatgctgc cggccagtat      120

attgaagcag cgtatgccaa ggccctgcgc caagagttgg cctccctagt tcaggttgac      180

aaaatgaaag gaattttgtc taagcttgag gcctttgctg aaacagccac tccgtccctt      240

gacgcaggtg acgtggttgt tctgcttggg caacatcctc acggatccat cctcgatatt      300

aatgtgggga ctgaaaggaa aactgtgtcc gtgcaagaga cccggagctt aggtggttcc      360

aaattcagtg tttgcactgt cgtgtccaac acacccgtgg acgccttaac tggcatccca      420

ctccagacac caacccctct ttttgagaat ggtccgcgtc accgtggtga ggaagacgat      480

cttagagtcg agaggatgaa gaaacactgt gtgtccctcg gcttccacaa cattaatggc      540

aaagtttact gcaaaatttg ggacaagtcc accggtgata ccttttatac cgatgattcc      600

cggtacaccc aagaccttgc attccaggac aggtcagccg actacagaga cagggattat      660

gagggtgtgc aaaccgcccc ccaacagggc tttgatccaa agtctgaaac ccctattggc      720

actgtggtga tcggcggtat cacgtataac aggtacctga tcaaaggtaa ggaggtcttg      780

gttcccaagc ctgacaactg ccttgaa                                          807


<210>  25
<211>  807
<212>  DNA
<213>  Porcine reproductive and respiratory syndrome virus

<400>  25
tccctgacgg ctgctctagc ttgcaagttg tcgcaagctg accttgattt tttgtccagc       60

ttaacgaact tcaagtgctt tgtatctgct tcaaacatga aaaatgccgc tggccagtac      120

attgaagcag cttatgccag ggccctacgc caagagttgg cctctctagt tcaggttgac      180

aagatgaaag gagttttgtc caagctcgag gcctttgctg aaacagccac cccgtccctt      240

gacacaggtg acgtggttgt tctgcttggg caacatcctc acggatccat cctcgatatt      300

aatgtgggga ctgaaaggaa aactgtgtcc gtgcaagaga cccggagcct tggcggctcc      360

aaattcagtg tttgcactgt tgtgtccaac acacccgtgg atgccttaac cggcatccca      420

ctccagacac caacccctct ttttgagaat ggtccgcgtc atcgcagtga ggaagacgat      480

cttaaagtcg agaggatgaa gaaacactgt gtgtccctcg gctttcacaa catcaatggc      540

aaagtatact gcaaaatctg ggataagtct accggtgaca ccttttacac cgatgattcc      600

cggtataccc aagactatgc ttttcaggac aggtcagccg actacagaga cagggactat      660

gaaggtgtgc aaaccgcccc ccaacagggc tttgatccaa agtctgaaac ccctgttggc      720

actgtagtga tcggcggtat tacgtataat aggtacctga tcaaaggtaa ggagatcctg      780

gttcccaagc ctgacaactg ccttgaa                                          807


<210>  26
<211>  807
<212>  DNA
<213>  Porcine reproductive and respiratory syndrome virus

<400>  26
tccctaacgg ctgctctagc ttgcaagttg tcgcaggctg accttgattt tttgtccagc       60

ttaacgaact tcaagtgctt tgtatctgct tcaaacatga aaaatgccgc cggccagtac      120

attgaagcag cttatgccaa ggccctgcgc caagagttgg cctctctagt tcaggttgac      180

aaaatgaaag gagttttatc caagctcgaa gcctttgctg aaacagccac tccgtctctt      240

gacacaggtg acgtggttgt tttgcttggg caacaccctc acggatccat cctcgatatt      300

aatgtgggaa atgaaaggaa aactgtgtcc gtgcaagaga cccggagcct aggcggctcc      360

aaattcagtg tttgcactgt cgtttccaac acacccgtgg acgccttaac cggcatccca      420

ctccagacac caacccctct ttttgagaat ggtccgcgcc atcgctgtga ggaagacgat      480

cttaaagtcg agaggaaaaa aaaacactgt gtttccctcg gctttcacaa catccatggc      540

aaagtttact gcaaaatttg ggacaagtct accggtgaca ccttttacac cgatgattct      600

cggtacaccc aagaccatgc ttttcaggat aggtcagccg atcacagaga cagagactac      660

gagggcgtgc aaaccgcccc ccaacaggga tttgacccaa agtccgagac ccctgttggc      720

actgtagtga tcggcggcat tacgtataac aggtacctga tcaaaggtaa ggaggtcctg      780

gttcgtaagc ctgacaactg cctcgaa                                          807


<210>  27
<211>  807
<212>  DNA
<213>  Porcine reproductive and respiratory syndrome virus

<400>  27
tccctgacgg ctgccctagc ttgcaagtta tcgcaggctg accttgattt tttgtccagc       60

ttaacgaact tcaagtgctt tgtatctgct tcgaacatga aaaatgctgc tggccagtac      120

attgaagcag cttatgccaa ggccttgcgc caagagttgg cctctctagt tcaggtcgat      180

aagatgaaag gaattttgtc caagctcgag gcctttgctg aaaccgccac cccgtccctt      240

gatccaggtg acgtggttgt tctgcttggg caacatcctc atggttccat cctcgatatt      300

aatgtgggga ctgaaaggaa aaccgtgtct gtgcaagaga cccggagcct aggcggctcc      360

aaattcagtg tttgtactgt cgtgtccaac acacctgtgg acgccttaac cggcatccca      420

ctccagacac caacccctct ttttgagaat ggtccgcgtc atcgcagtga ggaagacgac      480

ctcaaagtcg agaggatgaa gaaacattgt gtatccctcg gcttccacaa cattaatgga      540

agagtttact gtaaaatttg ggacaagtct accggtgaca ccttttatac cgatgattcc      600

cggtataccc aagatcatgc ttttcaggat aggtcagccg actacagaga cagggactat      660

gaaggtgtgc aagccgctcc cccaaagggc tttgatccaa agtctgaaac ccctgttggc      720

actgtattga attggcgtgt tacgtataac aggtacctga tcaaaggtaa ggaggtcctg      780

gttcccaaac ccgaccactg cctagag                                          807


<210>  28
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Primer Nsp1F

<400>  28
cgcggatcct ctgggatact tgatcggtg                                         29


<210>  29
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Primer Nsp1R

<400>  29
ccgctcgagg ccgtaccact tgtgac                                            26


<210>  30
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Primer Nsp2pF

<400>  30
cgcggatccg ctggaaagag agcaag                                            26


<210>  31
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Primer Nsp2pR

<400>  31
ccgctcgagt cgagtatcat ttttgggagg aac                                    33


<210>  32
<211>  32
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Primer Nsp4F

<400>  32
cgcggatccg gtgctttcag aactcgaaag cc                                     32


<210>  33
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Primer Nsp4R

<400>  33
ccgctcgagt tccagttcag gtttggcagc                                        30


<210>  34
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Primer Na-nsp7F

<400>  34
cgcggatcct ctctgactgg tgccctcgct atg                                    33


<210>  35
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Primer Na-nsp7R

<400>  35
ccgctcgagt tcccattgaa ctcttccat                                         29


<210>  36
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Primer Eu-nsp7F

<400>  36
ggaattctcc ctgacggctg ctctagcttg                                        30


<210>  37
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Primer Eu-nsp7R

<400>  37
gtgctcgagt ttcaaggcag ttgtcaggct tgg                                    33


<210>  38
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Primer Nsp8F

<400>  38
cgcggatccg ctgcaaagct ttccgtgg                                          28


<210>  39
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Primer Nsp8R

<400>  39
ccgctcgagg tttaaacact gctccttagt c                                      31


<210>  40
<211>  807
<212>  DNA
<213>  Porcine reproductive and respiratory syndrome virus

<400>  40
tccctgacgg ctgctctggc ttgcaagttg tcgcaagctg accttgactt tttgtccagc       60

ttaacgaact tcaagtgctt tgtatctgcc tcaaacatga aaaatgccgc cggccagtac      120

attgaggcag cttatgctag ggccctacgc caggagttgg cttctctggt tcaggttgat      180

aaaatgaaag ggattctatc caagcttgag gcctttgctg aaacggccac tccgtccctt      240

gacacaggtg acgtagttgt tctacttggg caacatcctc gcggatccat cctcgatatt      300

aatgtaggga ctgaaaggaa aactgtgtct gtgcaagaga cccggagctt aggtggttcc      360

aaattcagtg tttgcactgt cgtgtccaac acacccgtgg acgccttaac tggcatccca      420

ctccagacac caacccctct ttttgagaat ggcccgcgtc atcgtggtga ggaagacgac      480

cttagtgtcg agaggaagaa gaaacactgt gtgtccctcg gcttccacaa cattaatggc      540

aaagtttact gcaaaatttg ggacaagtcc accggagata ccttttatac cgatgattcc      600

cggtacaccc aagaccttgc attccaggac aggtcagccg actacagaga cagggattat      660

gagggtgtgc aaaccgcccc ccaacagggc tttgatccaa agtctgaaac ccctattggc      720

actgtagtga tcggcggtgt tacgtataac aggtacctga tcaaaggtaa ggaggtcttg      780

gttcccaagc ctgacaactg ccttgaa                                          807


<210>  41
<211>  807
<212>  DNA
<213>  Porcine reproductive and respiratory syndrome virus

<400>  41
tccctgacgg ctgctctagc ttgcaagttg tcgcaggctg atcttgactt cttgtccagc       60

ttgacgaact tcaagtgctt tgtatctgct tcaaacatga aaaatgctgc tggccagtac      120

attgaagcag cttatgctaa ggccctgcgc caagagttgg cttctctggt tcaggttgac      180

aaaatgaaag gaattttgtc caagctcgag gcctttgctg aaacagccac cccgtccctt      240

gacacaggtg acgtggttgt tctgcttggg caacatcctc acggatccat cctcgatatt      300

aatgtgggga ctgaaaggaa aactgtgtcc gtgcaagaga cccggagcct aggtggttcc      360

aaattcagtg tttgcactgt cgtgtccaac acacccgtgg acgccttaac tggcatccca      420

ctccagatac cggcacctct ttttgagaat ggtccgcgtc atcgtggcga ggaagatgat      480

cttaaagtcg agaggatgaa gaaacactgt gtgtctctcg gcttccacaa catcaatggc      540

aaagtttact gtaaaatttg ggacaagtct accggtgaca cattttacac cgacgattcc      600

cggtacaccc aagatcatgc ttttcaggac aggtcagctg actacagaga cagggactat      660

gagggtatgc gaaccgcccc ccaacaggga tttgatccaa agtctgaaac ccctgttggc      720

actgttgtga tcggcggtat tacgtataac aggtatctga tcaaaggtaa ggaggtcctg      780

gttcccaagc ctgacaactg ccttgaa                                          807


<210>  42
<211>  259
<212>  PRT
<213>  Porcine

<300>
<308>   NP_740601
<309>  1998-04-02
<313>  (1)..(259)

<400>  42

Ser Leu Thr Gly Ala Leu Ala Met Arg Leu Asn Asp Glu Asp Leu Asp 
1               5                   10                  15      


Phe Leu Met Lys Trp Thr Asp Phe Lys Cys Phe Val Ser Ala Ser Asn 
            20                  25                  30          


Met Arg Asn Ala Ala Gly Gln Phe Ile Glu Ala Ala Tyr Ala Lys Ala 
        35                  40                  45              


Leu Arg Val Glu Leu Ala Gln Leu Val Gln Val Asp Lys Val Arg Gly 
    50                  55                  60                  


Val Leu Ala Lys Leu Glu Ala Phe Ala Asp Thr Val Ala Pro Gln Leu 
65                  70                  75                  80  


Ser Pro Gly Asp Ile Val Val Ala Leu Gly His Thr Pro Val Gly Ser 
                85                  90                  95      


Ile Phe Asp Leu Lys Val Gly Ser Thr Lys His Thr Leu Gln Ala Ile 
            100                 105                 110         


Glu Thr Arg Val Leu Ala Gly Ser Lys Met Thr Val Ala Arg Val Val 
        115                 120                 125             


Asp Pro Thr Pro Thr Pro Pro Pro Ala Pro Val Pro Ile Pro Leu Pro 
    130                 135                 140                 


Pro Lys Val Leu Glu Asn Gly Pro Asn Ala Trp Gly Asp Glu Asp Arg 
145                 150                 155                 160 


Leu Asn Lys Lys Lys Arg Arg Arg Met Glu Ala Leu Gly Ile Tyr Val 
                165                 170                 175     


Met Gly Gly Lys Lys Tyr Gln Lys Phe Trp Asp Lys Asn Ser Gly Asp 
            180                 185                 190         


Val Phe Tyr Glu Glu Val His Asn Asn Thr Asp Glu Trp Glu Cys Leu 
        195                 200                 205             


Arg Val Gly Asp Pro Ala Asp Phe Asp Pro Glu Lys Gly Thr Leu Cys 
    210                 215                 220                 


Gly His Val Thr Ile Glu Asn Lys Ala Tyr His Val Tyr Ile Ser Pro 
225                 230                 235                 240 


Ser Gly Lys Lys Phe Leu Val Pro Val Asn Pro Glu Asn Gly Arg Val 
                245                 250                 255     


Gln Trp Glu 
            


<210>  43
<211>  269
<212>  PRT
<213>  Porcine reproductive and respiratory syndrome virus

<400>  43

Ser Leu Thr Ala Ala Leu Ala Cys Lys Leu Ser Gln Ala Asp Leu Asp 
1               5                   10                  15      


Phe Leu Ser Ser Leu Thr Asn Phe Lys Cys Phe Val Ser Ala Ser Asn 
            20                  25                  30          


Met Lys Asn Ala Ala Gly Gln Tyr Ile Glu Ala Ala Tyr Ala Lys Ala 
        35                  40                  45              


Leu Arg Gln Glu Leu Ala Ser Leu Val Gln Val Asp Lys Met Lys Gly 
    50                  55                  60                  


Ile Leu Ser Lys Leu Glu Ala Phe Ala Glu Thr Ala Thr Pro Ser Leu 
65                  70                  75                  80  


Asp Ala Gly Asp Val Val Val Leu Leu Gly Gln His Pro His Gly Ser 
                85                  90                  95      


Ile Leu Asp Ile Asn Val Gly Thr Glu Arg Lys Thr Val Ser Val Gln 
            100                 105                 110         


Glu Thr Arg Ser Leu Gly Gly Ser Lys Phe Ser Val Cys Thr Val Val 
        115                 120                 125             


Ser Asn Thr Pro Val Asp Ala Leu Thr Gly Ile Pro Leu Gln Thr Pro 
    130                 135                 140                 


Thr Pro Leu Phe Glu Asn Gly Pro Arg His Arg Gly Glu Glu Asp Asp 
145                 150                 155                 160 


Leu Arg Val Glu Arg Met Lys Lys His Cys Val Ser Leu Gly Phe His 
                165                 170                 175     


Asn Ile Asn Gly Lys Val Tyr Cys Lys Ile Trp Asp Lys Ser Thr Gly 
            180                 185                 190         


Asp Thr Phe Tyr Thr Asp Asp Ser Arg Tyr Thr Gln Asp Leu Ala Phe 
        195                 200                 205             


Gln Asp Arg Ser Ala Asp Tyr Arg Asp Arg Asp Tyr Glu Gly Val Gln 
    210                 215                 220                 


Thr Ala Pro Gln Gln Gly Phe Asp Pro Lys Ser Glu Thr Pro Ile Gly 
225                 230                 235                 240 


Thr Val Val Ile Gly Gly Ile Thr Tyr Asn Arg Tyr Leu Ile Lys Gly 
                245                 250                 255     


Lys Glu Val Leu Val Pro Lys Pro Asp Asn Cys Leu Glu 
            260                 265                 


